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Test pyfastx for FASTQ parsing #21

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philres opened this issue Jan 13, 2022 · 0 comments

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philres commented Jan 13, 2022

catfishq/catfishq/cat_fastq.py

Line 241 in 4c42039

with pysam.FastxFile(filename) as fh:

Is it faster? Also pysam is a pretty massive dependency.

philres added the code-review label

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