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setup.cfg
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setup.cfg
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[metadata]
name = physioqc
url = https://github.com/physiopy/physioqc
download_url = https://github.com/physiopy/physioqc
author = The Physiopy Community
maintainer = The Physiopy Community
maintainer_email = [email protected]
classifiers =
Development Status :: 3 - Alpha
Intended Audience :: Science/Research
License :: OSI Approved :: Apache Software License
Programming Language :: Python :: 3
license = Apache-2.0
description = A toolbox to run automatic quality control of physiological data.
long_description = file:README.md
long_description_content_type = text/markdown; charset=UTF-8
platforms = OS Independent
provides =
physioqc
[options]
python_requires = >=3.6
install_requires =
numpy >=1.9.3,<2.0.0
pandas
peakdet
duecredit
tests_require =
pytest >=5.3
test_suite = pytest
zip_safe = False
packages = find:
include_package_data = True
[options.extras_require]
doc =
sphinx>=2.0
sphinx-argparse
sphinx_rtd_theme
myst-parser
style =
flake8>=4.0
black<23.0.0
isort<6.0.0
pydocstyle
codespell
test =
%(style)s
pytest >=5.3
pytest-cov
coverage
devtools =
pre-commit
dev =
%(devtools)s
%(doc)s
%(test)s
[options.entry_points]
console_scripts =
physioqc=physioqc.workflow:_main
[flake8]
doctest = True
exclude =
_version.py
./physioqc/cli/__init__.py
./physioqc/tests/*
versioneer.py
ignore = E126, E402, W503, F401, F811
max-line-length = 88
extend-ignore = E203, E501
extend-select = B950
per-file-ignores =
workflow.py:D401
[isort]
profile = black
skip_gitignore = true
extend_skip =
.autorc
.coverage*
.readthedocs.yml
.zenodo.json
codecov.yml
setup.py
versioneer.py
physioqc/_version.py
skip_glob =
docs/*
[pydocstyle]
convention = numpy
match =
physioqc/*.py
match_dir = physioqc/[^tests]*
[codespell]
skip = versioneer.py,.git,build,./docs/_build,./physioqc/_version.py
ignore-words-list = nd,commun,trough
write-changes =
count =
quiet-level = 3
[tool:pytest]
doctest_optionflags = NORMALIZE_WHITESPACE
xfail_strict = true
addopts = -rx
[coverage:run]
branch = True
omit =
physioqc/tests/*
docs/*
setup.py
versioneer.py
doi.py
__init__.py
*/__init__.py
*/*/__init__.py
[versioneer]
VCS = git
style = pep440
versionfile_source = physioqc/_version.py
versionfile_build = physioqc/_version.py
tag_prefix =
parentdir_prefix =