From bc2153a83554d6d8836a691b901f816e86dc97b4 Mon Sep 17 00:00:00 2001 From: Alexey Zabelkin Date: Sat, 3 Feb 2024 00:11:32 +0000 Subject: [PATCH] fixing maximum kmer count kmc flag --- src/filtering-KMC/kmer_counter.cpp | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/src/filtering-KMC/kmer_counter.cpp b/src/filtering-KMC/kmer_counter.cpp index 775382c..5e0a833 100644 --- a/src/filtering-KMC/kmer_counter.cpp +++ b/src/filtering-KMC/kmer_counter.cpp @@ -577,7 +577,7 @@ int run_filtering_kmc(const CFilteringParams& params) regOpt("-ci" + std::to_string(params.cutoffMin)); - regOpt("-cs" + std::to_string(params.maxCount)); + regOpt("-cx" + std::to_string(params.maxCount)); regOpt("-t" + std::to_string(params.nThreads));