Skip to content
New issue

Have a question about this project? Sign up for a free GitHub account to open an issue and contact its maintainers and the community.

By clicking “Sign up for GitHub”, you agree to our terms of service and privacy statement. We’ll occasionally send you account related emails.

Already on GitHub? Sign in to your account

gnr_resolve returns HTTP 503 Error #943

Closed
drinnnird-uoft opened this issue Jan 20, 2025 · 3 comments
Closed

gnr_resolve returns HTTP 503 Error #943

drinnnird-uoft opened this issue Jan 20, 2025 · 3 comments

Comments

@drinnnird-uoft
Copy link

library(taxize)
packageVersion("taxize") # ‘0.9.100.1’
sessionInfo()

R version 4.4.2 (2024-10-31 ucrt)
Platform: x86_64-w64-mingw32/x64
Running under: Windows 10 x64 (build 19045)

Matrix products: default


locale:
[1] LC_COLLATE=English_Canada.utf8  LC_CTYPE=English_Canada.utf8    LC_MONETARY=English_Canada.utf8
[4] LC_NUMERIC=C                    LC_TIME=English_Canada.utf8    

time zone: America/Toronto
tzcode source: internal

attached base packages:
[1] stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] taxize_0.9.100.1 geodist_0.1.0    sf_1.0-17        RANN_2.6.2       lubridate_1.9.3  forcats_1.0.0   
 [7] stringr_1.5.1    dplyr_1.1.4      purrr_1.0.2      readr_2.1.5      tidyr_1.3.1      tibble_3.2.1    
[13] ggplot2_3.5.1    tidyverse_2.0.0 

loaded via a namespace (and not attached):
 [1] gtable_0.3.5       xfun_0.47          bslib_0.8.0        lattice_0.22-6     tzdb_0.4.0        
 [6] vctrs_0.6.5        tools_4.4.2        generics_0.1.3     curl_5.2.2         parallel_4.4.2    
[11] proxy_0.4-27       fansi_1.0.6        pkgconfig_2.0.3    KernSmooth_2.23-24 data.table_1.16.0 
[16] uuid_1.2-1         lifecycle_1.0.4    conditionz_0.1.0   compiler_4.4.2     munsell_0.5.1     
[21] codetools_0.2-20   htmltools_0.5.8.1  class_7.3-22       sass_0.4.9         yaml_2.3.10       
[26] pillar_1.9.0       crayon_1.5.3       jquerylib_0.1.4    classInt_0.4-10    cachem_1.1.0      
[31] iterators_1.0.14   wk_0.9.3           foreach_1.5.2      nlme_3.1-166       tidyselect_1.2.1  
[36] digest_0.6.37      stringi_1.8.4      fastmap_1.2.0      grid_4.4.2         colorspace_2.1-1  
[41] cli_3.6.3          magrittr_2.0.3     triebeard_0.4.1    crul_1.5.0         utf8_1.2.4        
[46] e1071_1.7-14       ape_5.8            withr_3.0.1        scales_1.3.0       timechange_0.3.0  
[51] rmarkdown_2.28     zoo_1.8-12         hms_1.1.3          evaluate_1.0.0     knitr_1.48        
[56] s2_1.1.7           urltools_1.7.3     rlang_1.1.4        Rcpp_1.0.13        httpcode_0.3.0    
[61] glue_1.7.0         DBI_1.2.3          xml2_1.3.6         rstudioapi_0.16.0  jsonlite_1.8.8    
[66] R6_2.5.1           units_0.8-5 

Code:
resolv <- gnr_resolve(sp_checklist_test_item[, "species"], best_match_only = TRUE)

sp_checklist_test_item: tibble with one column, one row: species = "Uvaria leichhardtii"

>   resolv <- gnr_resolve(sp_checklist_test_item[, "species"], best_match_only = TRUE)
Error: Service Unavailable (HTTP 503)
@derek-corcoran-barrios
Copy link

I am Having the same issue

@cmbappleby
Copy link

It seems there is an issue with https://resolver.globalnames.org/.

@zachary-foster
Copy link
Collaborator

Global names resolver has been replaced with Global names verifier, so gnr_resolve will be removed in the next version of taxize, so I suggest transitioning to gna_verifier.

Sign up for free to join this conversation on GitHub. Already have an account? Sign in to comment
Labels
None yet
Projects
None yet
Development

No branches or pull requests

4 participants