From 558b9c7bf87e9ab4fd0c0af3f7aff6927bbe69be Mon Sep 17 00:00:00 2001
From: Ralf Stephan <ralf@ark.in-berlin.de>
Date: Wed, 3 Apr 2024 17:00:50 +0200
Subject: [PATCH] v2405

---
 CHANGES.txt                                     |  3 +++
 TODO.txt                                        | 17 ++++++++++-------
 build.gradle.kts                                |  4 ++--
 .../org/reactome/lit_ball/common/Changes.kt     |  9 +++++++++
 4 files changed, 24 insertions(+), 9 deletions(-)

diff --git a/CHANGES.txt b/CHANGES.txt
index 31eadce..71d0010 100644
--- a/CHANGES.txt
+++ b/CHANGES.txt
@@ -1,4 +1,7 @@
 ## START
+v2405
+ - new query type: S2 recommendations
+
 v2404
  - more date matcher fixes
  - don't discard non-DOI results / use archived directly by prefixing with "S2:"
diff --git a/TODO.txt b/TODO.txt
index f44b5db..f5a0748 100644
--- a/TODO.txt
+++ b/TODO.txt
@@ -1,4 +1,13 @@
- - query type 4: S2 recommendations https://api.semanticscholar.org/api-docs/recommendations
+ - new query from old (allowing change of keywords but shortcutting some download)
+ - new query from old (type 1,2,3 from type 1)
+ - easy change/selection of query path
+ - opening/closing filter dialog removes focus on list
+ - focus: clicking sort in filtering2 still grabs focus
+ - focus: clicking delete in annotate still grabs focus
+ - focus: when in paper detail dialog, cursor up/down still moves list (instead of scrolling details)
+ - going Main from annotate resets list pos
+ - TAB does not advance field in new query dialog etc
+ - manually add IDs to accepted by adding an IDs field to query settings dialog
 
 Doc:
  - json export
@@ -11,16 +20,10 @@ Doc:
 
 Features:
  - refactor: rename model functions so they reflect the event not the intent
- - clicking sort in filtering2 still grabs focus
- - clicking delete in annotate still grabs focus
- - going Main from annotate resets list pos
- - when in paper detail dialog, cursor up/down still moves list (instead of scrolling details)
- - new query from old (allowing change of keywords but shortcutting some download)
  - file selectors in settings dialog
  - HTTP buffer
  - complain if Q1 date filter in wrong format
  - settings mutex
- - manually add DOIs to accepted
  - when annotate, why is S2 accessed again? because some accepted dois are defect
 
 Other ideas:
diff --git a/build.gradle.kts b/build.gradle.kts
index 3f1c730..5e1af71 100644
--- a/build.gradle.kts
+++ b/build.gradle.kts
@@ -140,7 +140,7 @@ dependencies {
 buildConfig {
     packageName("org.reactome.lit_ball")  // forces the package. Defaults to '${project.group}'
     buildConfigField("String", "APP_NAME", "\"LitBall\"")
-    buildConfigField("String", "APP_VERSION", provider { "\"2404\"" })
+    buildConfigField("String", "APP_VERSION", provider { "\"2405\"" })
 }
 
 configurations.all {
@@ -152,7 +152,7 @@ configurations.all {
 compose.desktop {
     application {
         mainClass = "MainKt"
-        version = "2404"
+        version = "2405"
         group = "org.reactome"
         nativeDistributions {
             targetFormats(TargetFormat.Dmg, TargetFormat.Msi, TargetFormat.Deb)
diff --git a/src/main/kotlin/org/reactome/lit_ball/common/Changes.kt b/src/main/kotlin/org/reactome/lit_ball/common/Changes.kt
index 8f123c7..9f58495 100644
--- a/src/main/kotlin/org/reactome/lit_ball/common/Changes.kt
+++ b/src/main/kotlin/org/reactome/lit_ball/common/Changes.kt
@@ -2,6 +2,9 @@ package org.reactome.lit_ball.common
 
 object Changes {
     val text = """
+v2405
+ - new query type: S2 recommendations
+
 v2404
  - more date matcher fixes
  - don't discard non-DOI results / use archived directly by prefixing with "S2:"
@@ -12,6 +15,12 @@ v2403
  - fix expression search type matching
  - better handling of 492
 
+v2402
+ - HTTP 429 effectively means "use API key"
+ - use bulk API for paper refs too
+ - better list sync after manipulate filtered
+ - query type 1: more filters: pubdate, articletype
+
 v2401
  - filter button/dialog in paper lists
  - in paper list, put query name in header