test.yml

name: shpc test modules

on:
  pull_request: []

jobs:
  test:
    runs-on: ubuntu-latest
    strategy:
      fail-fast: false
      matrix:
        module: [[lmod, 8.4.27], [tcl, 4.7.1], [tcl, 5.0.1]]
        container_tech: [podman, singularity, docker]
    steps:
    - name: Install Dependencies
      run: |
        sudo apt-get install lua5.2 liblua5.2-dev lua-filesystem lua-posix tcl tcl-dev tcsh

    - name: Install Environment Modules
      if: ${{ matrix.module[0] == 'tcl' }}
      env:
        PKG_VERSION: ${{ matrix.module[1] }}
      run: |
        curl -LJO https://github.com/cea-hpc/modules/releases/download/v${PKG_VERSION}/modules-${PKG_VERSION}.tar.gz
        tar xfz modules-${PKG_VERSION}.tar.gz
        ls
        cd modules-${PKG_VERSION}
        ./configure
        make
        sudo make install

    - name: Install Lmod
      if: ${{ matrix.module[0] == 'lmod' }}
      env:
        PKG_VERSION: ${{ matrix.module[1] }}
      run: |
        PKG_URL="https://github.com/TACC/Lmod/archive/${PKG_VERSION}.tar.gz"
        wget $PKG_URL
        tar xfz ${PKG_VERSION}.tar.gz
        cd Lmod-${PKG_VERSION}
        ./configure --prefix=/usr/share && make && make install

    - uses: eWaterCycle/setup-singularity@v7
      if: ${{ matrix.container_tech == 'singularity' }}
      name: Install Singularity
      with:
        singularity-version: 3.7.1

    - name: Create conda environment
      run: conda create --quiet -c conda-forge --name shpc spython

    - uses: actions/checkout@v4
    - name: Install shpc
      run: |
        export PATH="/usr/share/miniconda/bin:$PATH"
        source activate shpc
        pip install -e .

    - name: Run python module tests (bash)
      shell: bash
      env:
        module_sys: ${{ matrix.module[0] }}
        container_tech: ${{ matrix.container_tech }}
      run: |
        case "${module_sys}" in
          lmod)
            . /usr/share/lmod/lmod/init/bash
            ;;
          tcl)
            . /usr/local/Modules/init/bash
            shopt expand_aliases || true
            shopt -s expand_aliases
            ;;
        esac

        export PATH="/usr/share/miniconda/bin:$PATH"
        source activate shpc
        shpc config set container_tech:${{ matrix.container_tech }}
        shpc config set module_sys:${module_sys}
        shpc config set enable_tty:false

        printf "\n\shpc test ============================================\n"
        shpc test python:3.9.5-alpine

        shpc install python:3.9.5-alpine

        module use ./modules
        module load python/3.9.5-alpine
        alias

        printf "\n\nmodule show ============================================\n"
        module show python/3.9.5-alpine

        printf "\n\nmodule whatis ==========================================\n"
        module whatis python/3.9.5-alpine

        printf "\n\nmodule help ============================================\n"
        module help python/3.9.5-alpine

        script_path=$(which python-exec)
        cat $script_path
        set -x
        python-exec echo donuts >test_output
        cat test_output
        grep --quiet donuts test_output

        python-container > container_output
        cat container_output

        python-run python --version >test_output
        cat test_output
        grep --quiet 'Python 3.9.5' test_output
        rm test_output

        mkdir -p tmp-modules
        shpc config set views_base:tmp-modules
        shpc view create noodles
        shpc view install noodles python:3.9.5-alpine

        shpc uninstall --force python:3.9.5-alpine
        shpc view --force delete noodles

    - name: Run python module tests (tcsh)
      shell: tcsh -e {0}
      env:
        module_sys: ${{ matrix.module[0] }}
        container_tech: ${{ matrix.container_tech }}
      run: |
        switch ("${module_sys}")
          case lmod:
            source /usr/share/lmod/lmod/init/tcsh
            breaksw
          case tcl:
            source /usr/local/Modules/init/tcsh
            breaksw
        endsw

        source /usr/share/miniconda/etc/profile.d/conda.csh
        conda activate shpc
        shpc config set container_tech:${{ matrix.container_tech }}
        shpc config set module_sys:${module_sys}
        shpc config set enable_tty:false

        shpc install python:3.9.5-alpine

        module use ./modules
        module load python/3.9.5-alpine
        alias

        printf "\n\nmodule show ============================================\n"
        module show python/3.9.5-alpine

        printf "\n\nmodule whatis ==========================================\n"
        module whatis python/3.9.5-alpine

        printf "\n\nmodule help ============================================\n"
        module help python/3.9.5-alpine

        python-container > container_output
        cat container_output

        python-exec echo donuts >test_output
        cat test_output
        grep --quiet donuts test_output

        python-run python --version >test_output
        cat test_output
        grep --quiet 'Python 3.9.5' test_output
        rm test_output

        mkdir -p tmp-modules
        shpc config set views_base:tmp-modules
        shpc view create noodles
        shpc view install noodles python:3.9.5-alpine

        shpc uninstall --force python:3.9.5-alpine
        shpc view --force delete noodles