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Add CTD for mouse #1

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rcavalcante opened this issue Nov 9, 2018 · 0 comments
Open

Add CTD for mouse #1

rcavalcante opened this issue Nov 9, 2018 · 0 comments
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@rcavalcante
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rcavalcante commented Nov 9, 2018

As part of this:

  1. Line 29 of data-raw/setup_combine_functions.R needs to be changed to
file = sprintf('data-raw/CTD_combine_file_%s.txt', org)
  1. The following line should be added to data-raw/setup_combine.R
build_combine(type = c('CTD'), org_code = c('Mm'), min_geneset_size = 10)
  1. To build the genesets run the first two lines from data-raw/setup_combine.R as well as the new build_combine() call
source('data-raw/setup_combine_functions.R')
devtools::load_all()
build_combine(type = c('CTD'), org_code = c('Mm'), min_geneset_size = 10)
  1. Run
devtools::document()
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