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Make a biological transformation notebook #747

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LucaMarconato opened this issue Nov 1, 2024 · 1 comment
Open

Make a biological transformation notebook #747

LucaMarconato opened this issue Nov 1, 2024 · 1 comment
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docs 📜 Documentation-related issues

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@LucaMarconato
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LucaMarconato commented Nov 1, 2024

The transformation notebook is centered on showing how the API works and not in telling a biological story (for instance it uses a raccoon image image instead of a biological dataset).

This issue tracks our plan to move the notebook in a more technical section aimed at methods developers and make a new notebooks targeting analysts, where a biological story making use of our transformation system is presented.

@LucaMarconato
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LucaMarconato commented Nov 1, 2024

We plan to use the Xenium Output Bundle (Xenium Explorer subset) dataset.

@LucaMarconato LucaMarconato added the docs 📜 Documentation-related issues label Nov 1, 2024
@quentinblampey quentinblampey moved this to 🏗️ In Progress in Basel Hackathon Nov 2024 Nov 13, 2024
@quentinblampey quentinblampey moved this from 🏗️ In Progress to 👀 In review in Basel Hackathon Nov 2024 Nov 14, 2024
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