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Error: Unable to run job: Job was rejected because job requests unknown queue "short" #82

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suntay-jm opened this issue Mar 14, 2024 · 5 comments

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@suntay-jm
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suntay-jm commented Mar 14, 2024

I changed the config file to "short", unsure what this is asking me to fix

@suntay-jm suntay-jm changed the title How do I update the script to either a DSL2 or an earlier version of Nextflow? Error: Unable to run job: Job was rejected because job requests unknown queue "short" Mar 14, 2024
@visze
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visze commented Mar 17, 2024

This is something you have to configure by yourself. You want to run the job via a cluster scheduler. Your queue names and resources will be very different to ours.

@suntay-jm
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By any chance, would you be available for a Zoom chat to walk me through the process? If not, I understand! I'm having trouble running the basic association workflow.

@visze
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visze commented Mar 21, 2024

Sorry not these times. I am on parental leave until June.

What is your experience level with nextflow?

@suntay-jm
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Sorry for the late response, I thought my response sent! Please enjoy your quality time with your family!

I'm very new to nextflow and have a beginner understanding on it.

@visze
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visze commented Mar 29, 2024 via email

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