MANIFEST.in

include README.md
include DEV_NOTES.md
include LICENSE
include NEWS
include MANIFEST.in
include data/config-canonical.ini
recursive-include xslt text.xsl html.xsl lib.xsl common.xsl filter.xsl hardyweinberg.xsl homozygosity.xsl emhaplofreq.xsl meta-to-r.xsl sort-by-locus.xsl allelelist-by-locus.xsl haplolist-by-group.xsl phylip-allele.xsl phylip-haplo.xsl
include SWIG/typemap.i
recursive-include emhaplofreq emhaplofreq.h Makefile
include gthwe/*.h gthwe/Makefile gthwe/README.1
include slatkin-exact/Makefile slatkin-exact/README
include pval/Makefile pval/dpq.h pval/nmath.h pval/Rconfig.h pval/Rmath.h
include pval/R_ext/Arith.h pval/R_ext/Boolean.h pval/R_ext/Error.h pval/R_ext/Mathlib.h pval/R_ext/RS.h
recursive-include tests *.py
recursive-include tests/data *.ini *.pop *.txt
recursive-include tests/data/output *.dat *.txt *.xml
exclude setup.cfg