run-tests.yml

name: Run Tests

on: [push, pull_request]

jobs:
  test:
    runs-on: ubuntu-latest

    steps:
    - name: Checkout repository
      uses: actions/checkout@v4

    - name: Set up Python
      uses: actions/setup-python@v5
      with:
        python-version: 3.8

    - name: Install dependencies
      run: |
        pip install pytest
        pip install numpy
        pip install scipy
        pip install statsmodels
        pip install h5py
        pip install matplotlib

    - name: Run fit-functions tests
      run: |
        pytest tests/testFitFunctions.py

    - name: Run AnalyzeH5.py and diff against expected plots
      run: |
        mkdir test
        python AnalyzeH5.py -f ../testData/lowFlux/SimpleClusters_c0_r334_n100.h5 -r 666 -s 2,15
        diff -r test/AnalyzeH5_r666_c0_r1_c14_testLabel_E.png ../testData/expected/analyzeH5Expected/AnalyzeH5_r666_c0_r1_c14_testLabel_E.png
        diff -r test/AnalyzeH5_r666_c0_testLabel_E.png ../testData/expected/analyzeH5Expected/AnalyzeH5_r666_c0_testLabel_E.png
        diff -r test/AnalyzeH5_r666_c0_testLabel_gainDistribution.png ../testData/expected/analyzeH5Expected/AnalyzeH5_r666_c0_testLabel_gainDistribution.png
        diff -r test/AnalyzeH5_r666_c0_r1_c14_testLabel_fitInfo.npy ../testData/expected/analyzeH5Expected/AnalyzeH5_r666_c0_r1_c14_testLabel_fitInfo.npy