From 40a05123cfca5e12f3daa1cf03b219d82e1bcde4 Mon Sep 17 00:00:00 2001 From: guilhermesena1 Date: Mon, 7 Dec 2020 16:46:39 -0800 Subject: [PATCH] preparing to make a 0.1.2 release, also adding some new dependencies on Makefile.am --- Makefile.am | 11 ++++++++--- configure.ac | 2 +- src/abismal.cpp | 2 +- 3 files changed, 10 insertions(+), 5 deletions(-) diff --git a/Makefile.am b/Makefile.am index 80e7084..e398a70 100644 --- a/Makefile.am +++ b/Makefile.am @@ -30,12 +30,17 @@ bin_PROGRAMS = abismal abismalidx simreads abismal_SOURCES = \ src/abismal.cpp \ - src/AbismalIndex.cpp + src/AbismalIndex.cpp \ + src/AbismalAlign.hpp \ + src/AbismalIndex.hpp \ + src/dna_four_bit_bisulfite.hpp abismalidx_SOURCES = \ src/abismalidx.cpp \ - src/AbismalIndex.cpp + src/AbismalIndex.cpp \ + src/AbismalIndex.hpp simreads_SOURCES = \ src/simreads.cpp \ - src/AbismalIndex.cpp + src/AbismalIndex.cpp \ + src/AbismalIndex.hpp diff --git a/configure.ac b/configure.ac index 381032a..fdbd88b 100644 --- a/configure.ac +++ b/configure.ac @@ -14,7 +14,7 @@ dnl but WITHOUT ANY WARRANTY; without even the implied warranty of dnl MERCHANTABILITY or FITNESS FOR A PARTICULAR PURPOSE. See the GNU dnl General Public License for more details. -AC_INIT([abismal], [0.1], [andrewds@usc.edu], +AC_INIT([abismal], [0.1.2], [andrewds@usc.edu], [abismal], [https://github.com/smithlabcode/abismal]) dnl the config.h is not currently #included in the source, and only dnl used to keep command lines short. diff --git a/src/abismal.cpp b/src/abismal.cpp index f46fb3a..4b48e27 100644 --- a/src/abismal.cpp +++ b/src/abismal.cpp @@ -1523,7 +1523,7 @@ select_max_candidates(const bool sensitive_mode, int main(int argc, const char **argv) { try { - static const string ABISMAL_VERSION = "0.1"; + static const string ABISMAL_VERSION = "0.1.2"; string index_file; string outfile; string stats_outfile = "";