v5.5.1
Performance Improvements
- autobump bio/cutadapt/pe (#3550) (8dc7d5f)
- autobump bio/cutadapt/se (#3549) (fcb5a3d)
- autobump bio/dada2/add-species (#3572) (f80df41)
- autobump bio/dada2/assign-species (#3567) (b2b8aa6)
- autobump bio/dada2/assign-taxonomy (#3566) (4a52888)
- autobump bio/dada2/collapse-nomismatch (#3561) (7336f21)
- autobump bio/dada2/dereplicate-fastq (#3559) (ff6ae97)
- autobump bio/dada2/filter-trim (#3564) (7a44108)
- autobump bio/dada2/learn-errors (#3562) (cf4d4c5)
- autobump bio/dada2/make-table (#3560) (ccceca5)
- autobump bio/dada2/merge-pairs (#3571) (c3ce836)
- autobump bio/dada2/quality-profile (#3570) (f6bec9b)
- autobump bio/dada2/remove-chimeras (#3563) (469ae13)
- autobump bio/dada2/sample-inference (#3565) (6abbd40)
- autobump bio/delly (#3578) (6acdb27)
- autobump bio/deseq2/deseqdataset (#3568) (89ad456)
- autobump bio/deseq2/wald (#3569) (c7d448e)
- autobump bio/enhancedvolcano (#3551) (e9b05eb)
- autobump bio/freebayes (#3579) (793dbdb)
- autobump bio/gdc-api/bam-slicing (#3540) (be07804)
- autobump bio/hifiasm (#3541) (ac72153)
- autobump bio/hifiasm (#3552) (78986be)
- autobump bio/last/lastal (#3554) (ae1eef1)
- autobump bio/last/lastdb (#3553) (783b6eb)
- autobump bio/multiqc (#3573) (a5379bc)
- autobump bio/open-cravat/module (#3556) (478426e)
- autobump bio/open-cravat/run (#3555) (e4057fb)
- autobump bio/pbmm2/align (#3557) (237d150)
- autobump bio/pbmm2/index (#3558) (7b6aa5c)
- autobump bio/pcaexplorer/pcaplot (#3580) (561ea6c)
- autobump bio/sourmash/compute (#3543) (c8c8cdb)
- autobump bio/subread/featurecounts (#3544) (edfac80)
- autobump bio/tximport (#3576) (b41d72b)
- autobump bio/varlociraptor/call-variants (#3548) (b18ec90)
- autobump bio/varlociraptor/control-fdr (#3545) (75fae1d)
- autobump bio/varlociraptor/preprocess-variants (#3547) (48fa286)
- autobump bio/vsearch (#3574) (d451c9e)
- autobump utils/datavzrd (#3538) (0ed0bda)
- autobump utils/datavzrd (#3577) (a63bdf9)