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Streptomyces coelicolor Cellular Automata

Reproduction of the model of mutation-driven division of labor in the antibiotic-producing bacterium Streptomyces coelicolor by Colizzi et al. from their paper "Evolution of genome fragility enables microbial division of labor" (bioRxiv). Rewritten in Julia for learning and benchmarking purposes only.

Bacterium colonies

Bacterium colonies over 20 growth cycles.

Antibiotics density

Antibiotics density over 20 growth cycles (relative colormap normalization).