diff --git a/single_subject/batch_single_subject.sh b/single_subject/batch_single_subject.sh index ff5314a..370caad 100755 --- a/single_subject/batch_single_subject.sh +++ b/single_subject/batch_single_subject.sh @@ -438,7 +438,7 @@ cd ../t2 # Segment the spinal nerve rootlets sct_deepseg -i t2.nii.gz -task seg_spinal_rootlets_t2w -qc ~/qc_singleSubj # Check results using FSLeyes -fsleyes t2.nii.gz -cm greyscale t2_seg.nii.gz -cm subcortical -a 70.0 & +fsleyes t2.nii.gz -cm greyscale t2_rootlets.nii.gz -cm subcortical -a 70.0 & # Canal segmentation sct_deepseg -i t2.nii.gz -task canal_t2w -qc ~/qc_singleSubj