From 5e513b5270c11c6dc118ac78455b06a8fe5c9fb0 Mon Sep 17 00:00:00 2001
From: RAHenriksen <rah@hotmail.dk>
Date: Wed, 13 Nov 2024 11:13:38 +0100
Subject: [PATCH] update conda list within environment

---
 .github/workflows/bifrost_sp_ecoli_workflow.yml | 2 +-
 1 file changed, 1 insertion(+), 1 deletion(-)

diff --git a/.github/workflows/bifrost_sp_ecoli_workflow.yml b/.github/workflows/bifrost_sp_ecoli_workflow.yml
index 78c8b4b..7542201 100644
--- a/.github/workflows/bifrost_sp_ecoli_workflow.yml
+++ b/.github/workflows/bifrost_sp_ecoli_workflow.yml
@@ -87,4 +87,4 @@ jobs:
           --env BIFROST_DB_KEY=${{ secrets.MONGODB_ATLAS_CONNECTION }} \
           --env CONDA_ENV_NAME="${{ env.ENV_NAME }}" \
           bifrost_sp_ecoli_image \
-          bash -c "conda list"
\ No newline at end of file
+          bash -c "conda activate $CONDA_ENV_NAME && conda list"
\ No newline at end of file