CPC2 Translation of the transcripts

[hhtiantt]

Hi Nakul,

Thank you for developing such an incredible tool! I am currently using your pipeline to analyze my data. However, I encountered some problems during step 13 “CPC2 Translation of the transcripts”. Specifically, I am unable to install the seqio module. I have tried several methods to resolve this issue, but to no avail. Python version 2.7.18

Error reported as follows:

pip install seqio
DEPRECATION: Python 2.7 reached the end of its life on January 1st, 2020. Please upgrade your Python as Python 2.7 is no longer maintained. pip 21.0 will drop support for Python 2.7 in January 2021. More details about Python 2 support in pip can be found at https://pip.pypa.io/en/latest/development/release-process/#python-2-support pip 21.0 will remove support for this functionality.
Collecting seqio
Using cached seqio-0.0.19.tar.gz (360 kB)
Collecting absl-py
Using cached absl-py-0.15.0.tar.gz (114 kB)
Collecting clu
Using cached clu-0.0.12.tar.gz (72 kB)
ERROR: Command errored out with exit status 1:
command: python -c 'import sys, setuptools, tokenize; sys.argv[0] = '"'"'/tmp/pip-install-q7JFfe/clu/setup.py'"'"'; __file__='"'"'/tmp/pip-install-q7JFfe/clu/setup.py'"'"';f=getattr(tokenize, '"'"'open'"'"', open)(__file__);code=f.read().replace('"'"'\r\n'"'"', '"'"'\n'"'"');f.close();exec(compile(code, __file__, '"'"'exec'"'"'))' egg_info --egg-base /tmp/pip-pip-egg-info-WdeZ7i
cwd: /tmp/pip-install-q7JFfe/clu/
Complete output (1 lines):
Python < 3.10 not supported anymore!
----------------------------------------
ERROR: Command errored out with exit status 1: python setup.py egg_info Check the logs for full command output.

I would really appreciate it if you could provide some guidance on how to solve this problem. Thank you very much for your time!

Best regards,
Francesca