From 3a6db759040228144dad25331193a39bcdde8709 Mon Sep 17 00:00:00 2001 From: mchernigovskaya Date: Wed, 6 Nov 2024 10:48:29 +0100 Subject: [PATCH] Update epitope-specific_TCR_AIRRs.rst --- docs_source/usecases/epitope-specific_TCR_AIRRs.rst | 1 + 1 file changed, 1 insertion(+) diff --git a/docs_source/usecases/epitope-specific_TCR_AIRRs.rst b/docs_source/usecases/epitope-specific_TCR_AIRRs.rst index 55a297f5..02655866 100644 --- a/docs_source/usecases/epitope-specific_TCR_AIRRs.rst +++ b/docs_source/usecases/epitope-specific_TCR_AIRRs.rst @@ -218,6 +218,7 @@ Figure below shows a UMAP plot constructed from a LIgO long-seed data simulation The UMAP was generated using RapTCR tool (Van Deuren et al., 2023). For more information on UMAP construction, please refer to the `RapTCR documentation `_ and the Gielis et al. manuscript (`biorxiv `_). +Figure 1: UMAP plot of LIgO-simulated data using long seeds. TCRs corresponding to different immune signals are shown in different colors. .. image:: ../_static/figures/UMAP.png :width: 1500