From 4d6fbe1aa9137916c9c57ee344d45f3796fc1839 Mon Sep 17 00:00:00 2001 From: mchernigovskaya Date: Mon, 4 Nov 2024 15:27:21 +0100 Subject: [PATCH] Update usecases.rst --- docs_source/usecases.rst | 2 +- 1 file changed, 1 insertion(+), 1 deletion(-) diff --git a/docs_source/usecases.rst b/docs_source/usecases.rst index 615fdacf..a26892cc 100644 --- a/docs_source/usecases.rst +++ b/docs_source/usecases.rst @@ -11,7 +11,7 @@ The LIgO manuscript showcases LIgO on two use cases. The following sections prov 2. :ref:`Manuscript use case 2: Limitations of conventional encoding schemes for repertoire-level binary classification when immune signals co-occur within the same AIR` -The following group of use cases is inspired by the manucript **"Revealing the hidden sequence distribution of epitope-specific TCR repertoires and its influence on machine learning model performance"** (`biorxiv `_). From these use cases you can learn how to define LIgO motifs inspired by VDJdb database, simulate epitope-specific TCRs based on these motifs, and inspect the simulated TCRs compared to experimental data. +The following group of use cases is inspired by the manucript **"Revealing the hidden sequence distribution of epitope-specific TCR repertoires and its influence on machine learning model performance"** (`biorxiv `_). From these use cases you can learn how to define LIgO motifs inspired by VDJdb database, simulate epitope-specific TCRs based on these motifs, and inspect the simulated TCRs compared to experimental data. 1. :ref:`Constructing LIgO motifs inspired by a database of TCR sequences with known antigen specificities`