DESCRIPTION

Package: piano
Type: Package
Title: Platform for integrative analysis of omics data
Version: 2.13.1
Date: 2022-09-13
Author@R: c(person("Leif", "Varemo Wigge", email = "piano.rpkg@gmail.com", role = "aut"),
            person("Intawat", "Nookaew", email = "piano.rpkg@gmail.com", role = "aut"))
Author: Leif Varemo Wigge <piano.rpkg@gmail.com> and Intawat Nookaew <piano.rpkg@gmail.com>
Maintainer: Leif Varemo Wigge <piano.rpkg@gmail.com>
Depends: R (>= 3.5)
Imports: BiocGenerics, Biobase, gplots, igraph, relations, marray, fgsea, shiny, DT, htmlwidgets, shinyjs, shinydashboard, visNetwork, scales, grDevices, graphics, stats, utils, methods
Suggests: yeast2.db, rsbml, plotrix, limma, affy, plier, affyPLM, gtools, biomaRt, snowfall, AnnotationDbi, knitr, rmarkdown, BiocStyle
Description: Piano performs gene set analysis using various statistical methods, from different gene level statistics and a wide range of gene-set collections. Furthermore, the Piano package contains functions for combining the results of multiple runs of gene set analyses.
License: GPL (>=2)
biocViews: Microarray, Preprocessing, QualityControl, DifferentialExpression,
           Visualization, GeneExpression, GeneSetEnrichment, Pathways
URL: http://www.sysbio.se/piano
BugReports: https://github.com/varemo/piano/issues
VignetteBuilder: knitr
RoxygenNote: 7.1.2