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Is there a simple way to extract the genotypes of the clones inferred by Lichee?
While the output (*trees.txt) contains which mutations occur at which clone (and the samples at which each clone is present), I was wondering if there's an option to get the actual clonal genotypes (e.g., Clone 1: AGCGGTCAAGGGACG.., etc).
Thank you very much in advance.
Joao
The text was updated successfully, but these errors were encountered:
Dear Victoria,
Is there a simple way to extract the genotypes of the clones inferred by Lichee?
While the output (*trees.txt) contains which mutations occur at which clone (and the samples at which each clone is present), I was wondering if there's an option to get the actual clonal genotypes (e.g., Clone 1: AGCGGTCAAGGGACG.., etc).
Thank you very much in advance.
Joao
The text was updated successfully, but these errors were encountered: