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wf-tasks.html
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<!DOCTYPE html>
<html lang="en">
<head>
<!--#include virtual="/validation_tasks_v2/includes/head_common_bs.html"-->
<title>Validation Tasks Module</title>
</head>
<body>
<div id="wrap">
<!-- Common page navigation -->
<!--#include virtual="/validation_tasks_v2/includes/page_header_bs.html"-->
<div class="container"> <!-- Begin main page content container -->
<div class="page-header">
<h3>Validation Tasks <small>All Tasks</small> <small id="span_identifier" class="pull-right displaynone"> </small></h3>
</div>
<!-- Tasks section -->
<div id="task-alt-dialog"></div>
<div id="task-dialog" title="Task Calculations">
<!-- Solvent calculation form -->
<form id="solvent-task-form" class="form-inline" role="form">
<fieldset>
<legend>Solvent position calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="solvent-task-form-inp-1">Options:</label>
<input id="solvent-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Link calculation form -->
<form id="link-task-form" class="form-inline" role="form">
<fieldset>
<legend>Link calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="link-task-form-inp-1">Options:</label>
<input id="link-task-form-inp-1" class="form-control my-task-form-args" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<form id="secstruct-task-form" enctype="multipart/formdata" class="form-inline" role="form">
<fieldset>
<legend>Secondary structure calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="secstruct-task-form-inp-1">Topology file name</label>
<input id="secstruct-task-form-inp-1" class="form-control" type="file" name="topfile" value="" size="60" />
</div>
<div class="form-group">
<label class="control-label" for="secstruct-task-form-inp-2">File type</label>
<select id="secstruct-task-form-inp-2" class="form-control" name="topfiletype" columns="3">
<option selected="selected" value="top">Topology</option>
</select>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- NA features calculation form -->
<form id="nafeature-task-form" class="form-inline" role="form">
<fieldset>
<legend>NA features calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="nafeature-task-form-inp-1">Options:</label>
<input id="nafeature-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Site calculation form -->
<form id="site-task-form" class="form-inline" role="form">
<fieldset>
<legend>Site calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="site-task-form-inp-1">Options:</label>
<input id="site-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Dictioinary check form -->
<form id="dict-check-task-form" class="form-inline" role="form">
<fieldset>
<legend>Dictionary check <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="dict-check-task-form-inp-1">Options:</label>
<input id="dict-check-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Extra check form -->
<form id="extracheck-task-form" class="form-inline" role="form">
<fieldset>
<legend>Extra geometric and consistency checks <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="extracheck-task-form-inp-1">Options:</label>
<input id="extracheck-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Validation report form -->
<form id="valreport-task-form" class="form-inline" role="form">
<fieldset>
<legend>Validation report <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="valreport-task-form-inp-1">Options:</label>
<input id="valreport-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Map calculation form -->
<form id="mapcalc-task-form" class="form-inline" role="form">
<fieldset>
<legend>Map calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="mapcalc-task-form-inp-1">Options:</label>
<input id="mapcalc-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- DCC calculation form -->
<form id="dcc-calc-task-form" class="form-inline" role="form">
<fieldset>
<legend>DCC calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="dcc-calc-task-form-inp-1">Options:</label>
<input id="dcc-calc-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- DCC refine calculation form -->
<form id="dcc-refine-calc-task-form" class="form-inline" role="form">
<fieldset>
<legend>DCC refinement calculation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="dcc-refine-calc-task-form-inp-1">Options:</label>
<input id="dcc-refine-calc-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Move by sym_op -->
<form id="trans-coord-task-form" enctype="multipart/formdata" class="form-inline" role="form">
<fieldset>
<legend>Transform Coordinates <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="trans-coord-task-form-inp-1">Instruction file name</label>
<input id="trans-coord-task-form-inp-1" class="form-control" type="file" name="transfile" value="" size="60" />
</div>
<div class="form-group">
<label class="control-label" for="trans-coord-task-form-inp-2">File type</label>
<select id="trans-coord-task-form-inp-2" class="form-control" name="transfiletype" columns="3">
<option selected="selected" value="symop">Symmerty Operators</option>
<option value="matrix">Matrix Operators</option>
</select>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Special position calculation form -->
<form id="special-position-task-form" class="form-inline" role="form">
<fieldset>
<legend>Special position check <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="special-position-task-form-inp-1">Options:</label>
<input id="special-position-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Special position calculation form -->
<form id="reassign-altids-task-form" class="form-inline" role="form">
<fieldset>
<legend>Reassign Alt Ids <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="reassign-altids-task-form-inp-1">Options:</label>
<input id="reassign-altids-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Isotropic B-value replacement form -->
<form id="biso-full-task-form" class="form-inline" role="form">
<fieldset>
<legend>Isotropic B-value replacement <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="biso-full-task-form-inp-1">Options:</label>
<input id="biso-full-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Merge replacement coordinates -->
<form id="merge-xyz-task-form" enctype="multipart/formdata" class="form-inline" role="form">
<fieldset>
<legend>Merge Replacement Coordinates <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="merge-xyz-task-form-inp-1">Replacement coordinate file name</label>
<input id="merge-xyz-task-form-inp-1" class="form-control" type="file" name="xyzfilename" value="" size="60" />
</div>
<div class="form-group">
<label class="control-label" for="merge-xyz-task-form-inp-2">File format</label>
<select id="merge-xyz-task-form-inp-2" class="form-control" name="xyzfileformat" columns="3">
<option selected="selected" value="cif">PDBx/mmCIF</option>
<option value="pdb">PDB</option>
</select>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<!-- Merge replacement coordinates -->
<form id="terminal-atoms-task-form" enctype="multipart/formdata" class="form-inline" role="form">
<fieldset>
<legend>Replace Terminal Atoms <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="terminal-atoms-task-form-inp-1">Option</label>
<select id="terminal-atoms-task-form-inp-1" class="form-control" name="terminalatomsoption" columns="3">
<option selected="selected" value="delete">delete</option>
<option value="rename">rename</option>
</select>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
<form id="geom-valid-task-form" class="form-inline" role="form">
<fieldset>
<legend>Update geometry validation <a href="wf-help.html"> <span class="glyphicon glyphicon-info-sign pull-right"></span> </a> </legend>
<div class="form-group">
<label class="control-label" for="geom-valid-task-form-inp-1">Options:</label>
<input id="geom-valid-task-form-inp-1" class="form-control" type="text" name="task-form-args" value="" size="80" placeholder="Command line arguments"/>
</div>
<input class="btn btn-primary my-task-form-submit" type="submit" value="Run"/>
<div class="my-task-form-status"></div>
<div class="my-task-form-links"></div>
</fieldset>
</form>
</div> <!-- end of task dialog -->
<!-- progress spinner -->
<div id="loading">
<div id="loadingcontent">
<p id="loadingspinner">
Running calculation ...
</p>
</div>
</div>
</div> <!-- End main page content container -->
</div> <!-- end wrap -->
<!--#include virtual="/validation_tasks_v2/includes/page_javascript_bs.html"-->
<!--#include virtual="/validation_tasks_v2/includes/page_footer_bs.html"-->
</body>
</html>