python-test_and_deploy.yml

# This workflow will install Python dependencies, run tests and lint with a single version of Python
# For more information see: https://help.github.com/actions/language-and-framework-guides/using-python-with-github-actions

name: PHOTONAI test and test deploy

on:
  push:
    branches: [ main, develop ]
  pull_request:
    branches: [ main, develop ]
  schedule:
    - cron: '0 10 5 * *'

jobs:
  coverage:
    name: Run PHOTONAI tests and publish test coverage
    runs-on: ubuntu-22.04

    services:
      mongodb:
        image: mongo:latest
        ports:
          - 27017:27017

    steps:
    - uses: actions/checkout@v4
    - name: Set up Python 3.9
      uses: actions/setup-python@v5
      with:
        python-version: 3.9
    - name: Install dependencies
      run: |
        pip install wheel flake8 pbr
        python setup.py egg_info
        pip install tensorflow pytest pytest-cov coveralls -r photonai.egg-info/requires.txt -r photonai/optimization/smac/requirements.txt -r photonai/optimization/nevergrad/requirements.txt
    - name: Test with pytest
      run: |
        PYTHONPATH=./ pytest ./test --cov=./photonai --full-trace
    - name: Coveralls
      run: coveralls
      env:
        COVERALLS_REPO_TOKEN: ${{ secrets.COVERALLS_REPO_TOKEN }}
        GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}
  deploy:
    name: Build and publish to TestPyPI
    runs-on: ubuntu-22.04
    if: github.ref == 'refs/heads/main'
    steps:
    - uses: actions/checkout@v4
      with:
        fetch-depth: 0
    - name: Set up Python 3.9
      uses: actions/setup-python@v5
      with:
        python-version: 3.9
    - name: Install pypa/build
      run: pip install build pbr wheel
    - name: Build a binary wheel and a source tarball
      run: python -m build -n --sdist --wheel --outdir dist/ .
    - name: Publish distribution to Test PyPI
      uses: pypa/gh-action-pypi-publish@release/v1
      with:
        user: __token__
        password: ${{ secrets.TEST_PYPI_API_TOKEN }}
        repository_url: https://test.pypi.org/legacy/