where is the groundTruthLabel stored after the UKF? is it created while the UKF is performed?

[anoushkrit]

When in _label.h5 creation, it requires groundTruthLabel as an argument to dlt_extract_tract_feat.py . I am facing trouble in finding how to create GroundTruthLabel, even after subject_specific_parcellation and anatomical tractography, I am not able to find a way to connect these dots.
The main question bothering me while understanding pnlbwh and SlicerDMRI pipeline is - how the labels are generated which are then fed into any model, be it CNN based DeepWMA or pointNet SupWMA. If there is a script which does the same, that would be really helpful in understanding the ecosystem your group has created

[gaunny]

When in _label.h5 creation, it requires groundTruthLabel as an argument to dlt_extract_tract_feat.py . I am facing trouble in finding how to create GroundTruthLabel, even after subject_specific_parcellation and anatomical tractography, I am not able to find a way to connect these dots. The main question bothering me while understanding pnlbwh and SlicerDMRI pipeline is - how the labels are generated which are then fed into any model, be it CNN based DeepWMA or pointNet SupWMA. If there is a script which does the same, that would be really helpful in understanding the ecosystem your group has created

hi! Have you solved your problem? I have the same problem as you and I want the groundtruth labels. :)