Error in normalize.quantiles.use.target(matrix(IR1), as.vector(IG0)) : ERROR; return code from pthread_create() is 22

[OberhammerF]

when running the example code to try the preprocessing, i get an error. If anybody knows how to resolve this, I would be very glad!
Many thanks in advance

Code i am using:

sdf = sesameDataGet('EPIC.1.SigDF')
sdf_preped = openSesame(sdf, prep="DB", func=NULL)

Error:

Error in normalize.quantiles.use.target(matrix(IR1), as.vector(IG0)) : 
  ERROR; return code from pthread_create() is 22

Session Info

R version 4.3.1 (2023-06-16)
Platform: x86_64-pc-linux-gnu (64-bit)
Running under: Ubuntu 22.04.3 LTS

Matrix products: default
BLAS:   /usr/lib/x86_64-linux-gnu/openblas-pthread/libblas.so.3 
LAPACK: /usr/lib/x86_64-linux-gnu/openblas-pthread/libopenblasp-r0.3.20.so;  LAPACK version 3.10.0

locale:
 [1] LC_CTYPE=en_US.UTF-8       LC_NUMERIC=C               LC_TIME=en_US.UTF-8        LC_COLLATE=en_US.UTF-8    
 [5] LC_MONETARY=en_US.UTF-8    LC_MESSAGES=en_US.UTF-8    LC_PAPER=en_US.UTF-8       LC_NAME=C                 
 [9] LC_ADDRESS=C               LC_TELEPHONE=C             LC_MEASUREMENT=en_US.UTF-8 LC_IDENTIFICATION=C       

time zone: Etc/UTC
tzcode source: system (glibc)

attached base packages:
[1] grid      stats     graphics  grDevices utils     datasets  methods   base     

other attached packages:
 [1] reactable_0.4.4      qs_0.25.5            details_0.3.0        gridExtra_2.3        plotly_4.10.3       
 [6] eulerr_7.0.0         summarytools_1.0.1   cowplot_1.1.1        RColorBrewer_1.1-3   sesame_1.20.0       
[11] sesameData_1.20.0    ExperimentHub_2.10.0 AnnotationHub_3.10.1 BiocFileCache_2.10.2 dbplyr_2.4.0        
[16] BiocGenerics_0.48.1  readxl_1.4.3         lubridate_1.9.3      forcats_1.0.0        stringr_1.5.0       
[21] dplyr_1.1.3          purrr_1.0.2          readr_2.1.4          tidyr_1.3.0          tibble_3.2.1        
[26] ggplot2_3.4.4        tidyverse_2.0.0     

loaded via a namespace (and not attached):
  [1] jsonlite_1.8.7                rstudioapi_0.15.0             shape_1.4.6                   magrittr_2.0.3               
  [5] magick_2.8.1                  farver_2.1.1                  rmarkdown_2.25                GlobalOptions_0.1.2          
  [9] zlibbioc_1.48.2               vctrs_0.6.4                   memoise_2.0.1                 RCurl_1.98-1.12              
 [13] base64enc_0.1-3               htmltools_0.5.6.1             S4Arrays_1.2.1                curl_5.1.0                   
 [17] cellranger_1.1.0              SparseArray_1.2.4             sass_0.4.7                    bslib_0.5.1                  
 [21] desc_1.4.2                    htmlwidgets_1.6.2             plyr_1.8.9                    cachem_1.0.8                 
 [25] mime_0.12                     lifecycle_1.0.3               iterators_1.0.14              pkgconfig_2.0.3              
 [29] Matrix_1.6-1.1                R6_2.5.1                      fastmap_1.1.1                 GenomeInfoDbData_1.2.11      
 [33] MatrixGenerics_1.14.0         shiny_1.7.5.1                 clue_0.3-65                   digest_0.6.33                
 [37] colorspace_2.1-0              AnnotationDbi_1.64.1          S4Vectors_0.40.2              rprojroot_2.0.3              
 [41] crosstalk_1.2.0               GenomicRanges_1.54.1          RSQLite_2.3.2                 labeling_0.4.3               
 [45] filelock_1.0.2                fansi_1.0.5                   timechange_0.2.0              httr_1.4.7                   
 [49] abind_1.4-5                   compiler_4.3.1                bit64_4.0.5                   withr_2.5.1                  
 [53] doParallel_1.0.17             pander_0.6.5                  backports_1.4.1               BiocParallel_1.36.0          
 [57] DBI_1.1.3                     MASS_7.3-60                   rappdirs_0.3.3                DelayedArray_0.28.0          
 [61] rjson_0.2.21                  tools_4.3.1                   interactiveDisplayBase_1.40.0 httpuv_1.6.12                
 [65] clipr_0.8.0                   glue_1.6.2                    promises_1.2.1                checkmate_2.3.0              
 [69] cluster_2.1.4                 reshape2_1.4.4                generics_0.1.3                gtable_0.3.4                 
 [73] tzdb_0.4.0                    preprocessCore_1.64.0         RApiSerialize_0.1.2           data.table_1.14.8            
 [77] hms_1.1.3                     stringfish_0.15.8             xml2_1.3.5                    utf8_1.2.4                   
 [81] XVector_0.42.0                BiocVersion_3.18.1            foreach_1.5.2                 pillar_1.9.0                 
 [85] later_1.3.1                   circlize_0.4.15               pryr_0.1.6                    lattice_0.21-8               
 [89] bit_4.0.5                     tidyselect_1.2.0              ComplexHeatmap_2.18.0         Biostrings_2.70.3            
 [93] wheatmap_0.2.0                knitr_1.44                    IRanges_2.36.0                SummarizedExperiment_1.32.0  
 [97] stats4_4.3.1                  xfun_0.40                     Biobase_2.62.0                rapportools_1.1              
[101] matrixStats_1.0.0             DT_0.30                       stringi_1.7.12                lazyeval_0.2.2               
[105] yaml_2.3.7                    evaluate_0.22                 codetools_0.2-19              tcltk_4.3.1                  
[109] BiocManager_1.30.22           cli_3.6.1                     RcppParallel_5.1.7            xtable_1.8-4                 
[113] jquerylib_0.1.4               munsell_0.5.0                 Rcpp_1.0.11                   GenomeInfoDb_1.38.8          
[117] png_0.1-8                     parallel_4.3.1                ellipsis_0.3.2                blob_1.2.4                   
[121] bitops_1.0-7                  viridisLite_0.4.2             scales_1.2.1                  crayon_1.5.2                 
[125] GetoptLong_1.0.5              rlang_1.1.1                   KEGGREST_1.42.0              

[OberhammerF]

updating sesame to 1.21.15 did not resolve the problem.

[OberhammerF]

BiocManager::install("preprocessCore", configure.args="--disable-threading") and restarting R studio fixed it!