Update bundle dependencies.

4DNucleome · Jul 2, 2024 · ceed140 · ceed140
1 parent a84aef8
commit ceed140
Show file tree

Hide file tree

Showing 11 changed files with 311 additions and 320 deletions.
diff --git a/requirements/constraints_py3.10.txt b/requirements/constraints_py3.10.txt
@@ -41,13 +41,13 @@ cloudpickle==3.0.0
     # via dask
 comm==0.2.2
     # via ipykernel
-coverage==7.5.3
+coverage==7.5.4
     # via partseg (pyproject.toml)
 czifile==2019.7.2
     # via partseg (pyproject.toml)
-dask==2024.6.0
+dask==2024.6.2
     # via napari
-debugpy==1.8.1
+debugpy==1.8.2
     # via ipykernel
 decorator==5.1.1
     # via ipython
@@ -73,7 +73,7 @@ fonticon-fontawesome6==6.4.0
     # via partseg (pyproject.toml)
 freetype-py==2.4.0
     # via vispy
-fsspec==2024.6.0
+fsspec==2024.6.1
     # via dask
 h5py==3.11.0
     # via partseg (pyproject.toml)
@@ -85,7 +85,7 @@ idna==3.7
     # via requests
 imagecodecs==2024.6.1
     # via partseg (pyproject.toml)
-imageio==2.34.1
+imageio==2.34.2
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
@@ -94,20 +94,20 @@ imageio==2.34.1
     #   scikit-image
 imagesize==1.4.1
     # via sphinx
-importlib-metadata==7.1.0
+importlib-metadata==8.0.0
     # via
     #   build
     #   dask
 in-n-out==0.2.1
     # via app-model
 iniconfig==2.0.0
     # via pytest
-ipykernel==6.29.4
+ipykernel==6.29.5
     # via
     #   partseg (pyproject.toml)
     #   napari-console
     #   qtconsole
-ipython==8.25.0
+ipython==8.26.0
     # via
     #   partseg (pyproject.toml)
     #   ipykernel
@@ -170,18 +170,16 @@ napari==0.4.19.post1
 napari-console==0.0.9
     # via napari
 napari-plugin-engine==0.2.0
-    # via
-    #   napari
-    #   napari-svg
-napari-svg==0.1.10
+    # via napari
+napari-svg==0.2.0
     # via napari
 nest-asyncio==1.6.0
     # via ipykernel
 networkx==3.3
     # via scikit-image
 nme==0.1.8
     # via partseg (pyproject.toml)
-npe2==0.7.5
+npe2==0.7.6
     # via
     #   -r requirements/version_denylist.txt
     #   napari
@@ -207,7 +205,7 @@ numpydoc==1.7.0
     # via napari
 oiffile==2024.5.24
     # via partseg (pyproject.toml)
-openpyxl==3.1.4
+openpyxl==3.1.5
     # via partseg (pyproject.toml)
 packaging==24.1
     # via
@@ -234,18 +232,18 @@ parso==0.8.4
     # via jedi
 partd==1.4.2
     # via dask
-partsegcore-compiled-backend==0.15.6
+partsegcore-compiled-backend==0.15.7
     # via partseg (pyproject.toml)
 partsegdata==0.10.0
     # via partseg (pyproject.toml)
 pexpect==4.9.0
     # via ipython
-pillow==10.3.0
+pillow==10.4.0
     # via
     #   imageio
     #   napari
     #   scikit-image
-pint==0.24
+pint==0.24.1
     # via napari
 platformdirs==4.2.2
     # via
@@ -259,7 +257,7 @@ pooch==1.8.2
     # via scikit-image
 prompt-toolkit==3.0.47
     # via ipython
-psutil==5.9.8
+psutil==6.0.0
     # via
     #   ipykernel
     #   napari
@@ -276,7 +274,7 @@ pure-eval==0.2.2
     # via stack-data
 pyconify==0.1.6
     # via superqt
-pydantic==2.7.4
+pydantic==2.8.0
     # via
     #   partseg (pyproject.toml)
     #   app-model
@@ -285,7 +283,7 @@ pydantic==2.7.4
     #   pydantic-compat
 pydantic-compat==0.1.2
     # via app-model
-pydantic-core==2.18.4
+pydantic-core==2.20.0
     # via pydantic
 pygments==2.18.0
     # via
@@ -310,29 +308,29 @@ pyqt5==5.15.10
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-pyqt5-qt5==5.15.2
+pyqt5-qt5==5.15.14
     # via pyqt5
 pyqt5-sip==12.13.0
     # via
     #   -r requirements/version_denylist.txt
     #   pyqt5
 pyqt6==6.7.0
     # via partseg (pyproject.toml)
-pyqt6-qt6==6.7.1
+pyqt6-qt6==6.7.2
     # via pyqt6
 pyqt6-sip==13.6.0
     # via pyqt6
 pyside2==5.15.2.1
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-pyside6==6.7.1
+pyside6==6.7.2
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-pyside6-addons==6.7.1
+pyside6-addons==6.7.2
     # via pyside6
-pyside6-essentials==6.7.1
+pyside6-essentials==6.7.2
     # via
     #   pyside6
     #   pyside6-addons
@@ -394,28 +392,28 @@ rpds-py==0.18.1
     # via
     #   jsonschema
     #   referencing
-scikit-image==0.23.2
+scikit-image==0.24.0
     # via
     #   partseg (pyproject.toml)
     #   napari
-scipy==1.13.1
+scipy==1.14.0
     # via
     #   partseg (pyproject.toml)
     #   napari
     #   scikit-image
-sentry-sdk==2.5.1
+sentry-sdk==2.7.1
     # via
     #   -r requirements/version_denylist.txt
     #   partseg (pyproject.toml)
-setuptools==70.0.0
+setuptools==70.2.0
     # via
     #   pyinstaller
     #   pyinstaller-hooks-contrib
 shellingham==1.5.4
     # via typer
 shiboken2==5.15.2.1
     # via pyside2
-shiboken6==6.7.1
+shiboken6==6.7.2
     # via
     #   pyside6
     #   pyside6-addons
@@ -454,7 +452,7 @@ sympy==1.12.1
     # via partseg (pyproject.toml)
 tabulate==0.9.0
     # via numpydoc
-tifffile==2024.5.22
+tifffile==2024.6.18
     # via
     #   partseg (pyproject.toml)
     #   czifile