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GeneProfiler

Application running on Genomic CDM (G-CDM) for exploring and analysis clinical sequencing data

Explore Your Data

ERD

Run Distributed Research

ERD

How to run

  1. Install genomic package.

Using devtools, install genomic package in Rstudio.

install.packages("devtools")
devtools::install_github("https://github.com/ABMI/GeneProfiler.git")

(If you want to install other branch, add parameter "package_test")

install_github("https://github.com/ABMI/GeneProfiler.git", ref = "develop")

Username issue

install_github("https://github.com/ABMI/GeneProfiler.git", ref = "develop", username = "username")
  1. Run genomic()
genomic::genomic()

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OMOP-CDM Extension for genomic data

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