Rename conda environment (#96) #468

	name: CI
	on: [push]

	jobs:
	miniconda:
	name: Setup and test
	runs-on: ${{ matrix.os }}
	strategy:
	matrix:
	os: ["ubuntu-latest"]
	steps:
	- uses: actions/checkout@v2
	- uses: snyk/actions/setup@master
	- uses: conda-incubator/setup-miniconda@v2
	with:
	activate-environment: test
	environment-file: environment.yml
	python-version: 3.8
	auto-activate-base: true

	- shell: bash -l {0}
	run: \|
	conda info
	conda list

	- name: Install earthspy
	shell: bash -l {0}
	run: \|
	pip install -e .

	- name: Checkout code
	uses: actions/checkout@v2
	with:
	# Full git history is needed to get a proper list of changed files within `super-linter`
	fetch-depth: 0

	- name: Lint code base
	uses: github/super-linter/[email protected]
	env:
	VALIDATE_ALL_CODEBASE: true
	VALIDATE_JSON: true
	VALIDATE_YAML: true
	DEFAULT_BRANCH: main
	GITHUB_TOKEN: ${{ secrets.GITHUB_TOKEN }}

	- name: Run tests and generate coverage report
	shell: bash -l {0}
	run: \|
	pip install pytest
	pip install pytest-cov
	pytest --cov=./ --cov-report=xml
	env:
	SH_CLIENT_ID: ${{ secrets.SH_CLIENT_ID }}
	SH_CLIENT_SECRET: ${{ secrets.SH_CLIENT_SECRET }}

	- name: Upload coverage to Codecov
	uses: codecov/codecov-action@v3
	with:
	directory: ./coverage/reports/
	fail_ci_if_error: true
	files: ./coverage.xml
	flags: unittests
	name: codecov-umbrella
	path_to_write_report: ./coverage/codecov_report.txt
	verbose: true

	- name: Run Snyk to check for vulnerabilities
	run: \|
	pip install -r dev-requirements.txt
	snyk test --file=dev-requirements.txt --package-manager=pip --severity-threshold=high
	env:
	SNYK_TOKEN: ${{ secrets.SNYK_TOKEN }}

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