DiffAbXL

README.md

@@ -3,7 +3,8 @@
 # DiffAbXL: 
 ##### Author: Talip Ucar ([email protected])
 
-The implementation of DiffAbXL benchmarked in the paper: [Benchmarking Generative Models for Antibody Design](https://www.biorxiv.org/content/10.1101/2024.10.07.617023v1). 
+The implementation of DiffAbXL benchmarked in the paper: [Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs](https://www.biorxiv.org/content/10.1101/2024.10.07.617023v4.full.pdf). \
+Please note that the paper was originally titled "Benchmarking Generative Models for Antibody Design" but we decided to change it to better highlight its core contributions.
 
 - This is a re-implementation of the original work, DiffAb: [[Paper](https://www.biorxiv.org/content/10.1101/2022.07.10.499510v5.abstract) and [Code](https://github.com/luost26/diffab/tree/main?tab=readme-ov-file)]
 
@@ -292,13 +293,13 @@ Weight & Biases can be used to track experiments. It is turned off by default, b
 ```
 @article {Ucar2024.10.07.617023,
 	author = {Ucar, Talip and Malherbe, Cedric and Gonzalez Hernandez, Ferran},
-	title = {Benchmarking Generative Models for Antibody Design},
+	title = {Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs},
 	elocation-id = {2024.10.07.617023},
 	year = {2024},
 	doi = {10.1101/2024.10.07.617023},
 	publisher = {Cold Spring Harbor Laboratory},
-	URL = {https://www.biorxiv.org/content/early/2024/10/11/2024.10.07.617023},
-	eprint = {https://www.biorxiv.org/content/early/2024/10/11/2024.10.07.617023.full.pdf},
+	URL = {https://www.biorxiv.org/content/early/2024/10/24/2024.10.07.617023},
+	eprint = {https://www.biorxiv.org/content/early/2024/10/24/2024.10.07.617023.full.pdf},
 	journal = {bioRxiv}
 }
 ```
@@ -309,7 +310,7 @@ If you use DiffAbXL in your own studies, and work, please cite it by using the f
 ```
 @Misc{talip_ucar_2024_DiffAbXL,
 	author =   {Talip Ucar},
-	title = {Benchmarking Generative Models for Antibody Design},
+	title = {Exploring Log-Likelihood Scores for Ranking Antibody Sequence Designs},
 	URL = {https://github.com/AstraZeneca/DiffAbXL},
 	month = {October},
 	year = {since 2024}