Skip to content

Commit

Permalink
update from form
Browse files Browse the repository at this point in the history
  • Loading branch information
sujaikumar committed Aug 18, 2023
1 parent c2ed6b0 commit c539f8b
Show file tree
Hide file tree
Showing 3 changed files with 38 additions and 18 deletions.
26 changes: 18 additions & 8 deletions README.md
Original file line number Diff line number Diff line change
@@ -1,23 +1,33 @@
# $SESSIONTITLE
# Annotating genomes the Ensembl way - General concepts + Case study

This session is part of [**Biodiversity Genomics Academy 2023**](https://BGA23.org)

## Session Leader(s)

$SESSIONLEADERS
Leanne Haggerty
Ensembl Genome Annotation Project Leader
EMBL-EBI

## Description

$SESSIONDESCRIPTION
By the end of this session you will have:

1. Obtained an overview of state-of-the art methods and tools for genome annotation
2. Understood their advantages/limitations in different use-cases
3. Gained a picture of the quality measures of existing annotations
4. Discussed the future of genome annotation methodologies

## Prerequisites

$SESSIONPREREQUISITES
1. Understand the terms genome assembly, reads, contigs
2. Understand what a gene model is, what introns and exons are
3. Understand what transcriptomic and protein data are
4. Understand the concept of sequence alignment

!!! warning "Please make sure you meet the prerequisites above"
!!! warning "Please make sure you MEET THE PREREQUISITES and READ THE DESCRIPTION above"

You will get the most out of this session if you meet the prerequisites above.

Please also read the description carefully to see if this session is relevant to you.

If you don't meet the prerequisites, please consider emailing tol-training at sanger.ac.uk to cancel your slot so that someone else on the waitlist might attend.

If you have a webinar-only or recording-only slot, there is no need to cancel that as these are view-only slots and are effectively unlimited.
If you don't meet the prerequisites or change your mind based on the description or are no longer available at the session time, please email tol-training at sanger.ac.uk to cancel your slot so that someone else on the waitlist might attend.
26 changes: 18 additions & 8 deletions docs/README.md
Original file line number Diff line number Diff line change
@@ -1,23 +1,33 @@
# $SESSIONTITLE
# Annotating genomes the Ensembl way - General concepts + Case study

This session is part of [**Biodiversity Genomics Academy 2023**](https://BGA23.org)

## Session Leader(s)

$SESSIONLEADERS
Leanne Haggerty
Ensembl Genome Annotation Project Leader
EMBL-EBI

## Description

$SESSIONDESCRIPTION
By the end of this session you will have:

1. Obtained an overview of state-of-the art methods and tools for genome annotation
2. Understood their advantages/limitations in different use-cases
3. Gained a picture of the quality measures of existing annotations
4. Discussed the future of genome annotation methodologies

## Prerequisites

$SESSIONPREREQUISITES
1. Understand the terms genome assembly, reads, contigs
2. Understand what a gene model is, what introns and exons are
3. Understand what transcriptomic and protein data are
4. Understand the concept of sequence alignment

!!! warning "Please make sure you meet the prerequisites above"
!!! warning "Please make sure you MEET THE PREREQUISITES and READ THE DESCRIPTION above"

You will get the most out of this session if you meet the prerequisites above.

Please also read the description carefully to see if this session is relevant to you.

If you don't meet the prerequisites, please consider emailing tol-training at sanger.ac.uk to cancel your slot so that someone else on the waitlist might attend.

If you have a webinar-only or recording-only slot, there is no need to cancel that as these are view-only slots and are effectively unlimited.
If you don't meet the prerequisites or change your mind based on the description or are no longer available at the session time, please email tol-training at sanger.ac.uk to cancel your slot so that someone else on the waitlist might attend.
4 changes: 2 additions & 2 deletions mkdocs.yml
Original file line number Diff line number Diff line change
@@ -1,5 +1,5 @@
site_name: TEMPLATE
edit_uri: https://github.com/bgacademy23/TEMPLATE/blob/main/docs
site_name: ensembl-annotation
edit_uri: https://github.com/bgacademy23/ensembl-annotation/blob/main/docs

nav:
- Home: README.md
Expand Down

0 comments on commit c539f8b

Please sign in to comment.