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Database to be changed for BLAST identification on viral metagenomics #364

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juanledesma78 opened this issue Nov 14, 2024 · 0 comments
Open

Database to be changed for BLAST identification on viral metagenomics #364

juanledesma78 opened this issue Nov 14, 2024 · 0 comments
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@victor5lm

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@juanledesma78
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The blast lablog needs to be modified to allow Pikavirus and BLAST using the same database.
The modifications are as follows:

  • including the new database viral_genomes_ncbi in line 10
    BLAST_DATABASE="/data/bi/references/BLAST_dbs/viral_ncbi/viral_genomes_ncbi"

  • modifing path to database in line 30 :
    -B /data/bi/references/BLAST_dbs/viral_ncbi/
@victor5lm victor5lm self-assigned this Nov 14, 2024
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@juanledesma78 @victor5lm