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update version of EvidentialGene (#550)
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################## BASE IMAGE ###################### | ||
FROM biocontainers/biocontainers:v1.2.0_cv2 | ||
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################## METADATA ###################### | ||
LABEL base_image="biocontainers:v1.2.0_cv2" | ||
LABEL version="1" | ||
LABEL software="evidential-gene" | ||
LABEL software.version="23jul15" | ||
LABEL about.summary="EvidentialGene is a genome informatics project for Evidence Directed Gene Construction for Eukaryotes" | ||
LABEL about.home="http://arthropods.eugenes.org/EvidentialGene/evigene/" | ||
LABEL about.documentation="http://arthropods.eugenes.org/EvidentialGene/evigene/docs/" | ||
LABEL about.license_file="http://arthropods.eugenes.org/about/about-EvidentialGene/" | ||
LABEL about.tags="Genomics, Transcriptomics" | ||
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################## MAINTAINER ###################### | ||
MAINTAINER Avani Bhojwani <[email protected]> | ||
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################## INSTALLATION ###################### | ||
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USER 0 | ||
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RUN apt-get update && apt-get upgrade -y && \ | ||
apt-get install -y perl cpanminus exonerate cd-hit ncbi-blast+ && \ | ||
wget -O EvidentialGene.tar http://arthropods.eugenes.org/EvidentialGene/other/evigene_old/evigene_older/evigene23jul15.tar && \ | ||
tar -xvf EvidentialGene.tar && rm EvidentialGene.tar && \ | ||
chmod +x evigene/scripts/*.pl && \ | ||
mv evigene /opt/ && \ | ||
apt-get clean && \ | ||
rm -rf /var/lib/apt/lists/* /tmp/* /var/tmp/* | ||
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ENV PATH="/opt/evigene/scripts:/opt/evigene/scripts/genoasm:/opt/evigene/scripts/genes:/opt/evigene/scripts/prot:/opt/evigene/scripts/genes/evgpipe_scriptwork:/opt/evigene/scripts/rnaseq:/opt/evigene/scripts/omcl:/opt/evigene/scripts/grid:/opt/evigene/scripts/ests:${PATH}" | ||
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USER biodocker | ||
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WORKDIR /data/ |