Update README.md

Updated biocLite to BiocManager for installing packages.
BioHPC · Oct 23, 2024 · 58ed135 · 58ed135
1 parent b4c75a2
commit 58ed135
Showing 1 changed file with 5 additions and 5 deletions.
diff --git a/README.md b/README.md
@@ -41,35 +41,35 @@ making up the windows to the window values in the control.
   * install by using the following R commands:
 
         > source("https://bioconductor.org/biocLite.R")  
-        > biocLite("biomaRt")  
+        > BiocManager::install("biomaRt")  
 
 - edgeR package
 
   * install by using the following R commands:
 
         > source("https://bioconductor.org/biocLite.R")  
-        > biocLite("edgeR")  
+        > BiocManager::install("edgeR")  
 
 - preprocessCore package
 
   * install by using the following R commands:
 
         > source("https://bioconductor.org/biocLite.R")  
-        > biocLite("preprocessCore")  
+        > BiocManager::install("preprocessCore") 
 
 - topGO package
 
   * install by using the following R commands:
 
         > source("https://bioconductor.org/biocLite.R")  
-        > biocLite("topGO")  
+        > BiocManager::install("topGO")  
 
 - Rgraphviz package
 
   * install by using the following R commands:
 
         > source("https://bioconductor.org/biocLite.R")  
-        > biocLite("Rgraphviz")
+        > BiocManager::install("Rgraphviz")
 
 - shiny package: