Refactor tcm to work with AAs again
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accept SeqOrView{<:AminoAcidAlphabet} and add
input validation checks
camilogarciabotero
changed the title
tcm to work with AAs againtpm to work with AAs again
camilogarciabotero
changed the title
tpm to work with AAs againtcm to work with AAs again
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This pull request updates the VectorizedKmers version to 0.x and adds CPGPOS and CPGNEG to the exported variables. Additionally, the
transition_count_matrixfunction was refactored to acceptSeqOrView{<:AminoAcidAlphabet}and add input validation checks.Commits:
Update VectorizedKmers version to 0.x
Add CPGPOS and CPGNEG to exported variables
Refactor
transition_count_matrixfunction to accept SeqOrView{<:AminoAcidAlphabet} and add input validation checksImprove the documentation of the
logg_odds_ratio_matrixandlogg_odds_ratio_scoreand make them row-stochastic assertedFiles changed:
Project.toml
models.jl
perronfrobenius.jl
tests/runtests.jl