v0.2.12

DESCRIPTION

@@ -1,6 +1,6 @@
 Package: MVPapp
 Title: Model Visualization Platform
-Version: 0.2.11
+Version: 0.2.12
 Authors@R: c(
     person("Steve", "Choy", email = "[email protected]", role = c("aut", "cre")),
     person("Jin Gyu", "Kim", role = "aut"))
@@ -51,9 +51,9 @@ Suggests: readr,
 Depends: R (>= 3.5.0)
 LazyData: true
 Collate: "utils-pipe.R"
-         "ui_settings_v_0_2_11.R"
+         "ui_settings_v_0_2_12.R"
          "code_templates_v_0_2_10.R"
-         "functions_v_0_2_11.R"
+         "functions_v_0_2_12.R"
          "config.R"
          "run_mvp.R"
          "data.R"

NAMESPACE

@@ -36,6 +36,7 @@ export(bspop_cov_sdlog)
 export(bspop_custom_cov)
 export(bspop_custom_sampling_cb)
 export(bspop_custom_sampling_text)
+export(bspop_data_plot_options)
 export(bspop_data_stat_sum)
 export(bspop_dataset_cleaning)
 export(bspop_dataset_code)
@@ -49,11 +50,16 @@ export(bspop_dose)
 export(bspop_dose_value)
 export(bspop_download_cpp_model)
 export(bspop_download_plot)
+export(bspop_download_plot_all)
 export(bspop_dp_checkbox)
+export(bspop_filter_by_id)
 export(bspop_generate_model)
+export(bspop_highlight_var)
+export(bspop_ind_plot_options)
 export(bspop_infdur)
 export(bspop_infdur_cb)
 export(bspop_metrics_by_param_range)
+export(bspop_model_code)
 export(bspop_mw_value)
 export(bspop_nca_tooltip)
 export(bspop_nsubj_warning)
@@ -62,6 +68,7 @@ export(bspop_param_values)
 export(bspop_password)
 export(bspop_password_github)
 export(bspop_percentiles)
+export(bspop_plotly_file_name_all_label)
 export(bspop_plotly_file_name_label)
 export(bspop_plotly_width_height)
 export(bspop_plotly_width_height_corr)
@@ -104,6 +111,7 @@ export(custom_cov_dist_lab)
 export(custom_cov_label)
 export(custom_cov_placeholder)
 export(digits_name)
+export(do_data_page_ind_plot)
 export(do_data_page_plot)
 export(dp_checkbox_name)
 export(draw_correlation_plot)
@@ -128,8 +136,11 @@ export(label_color_data_by)
 export(label_combine_nm_data)
 export(label_db)
 export(label_dose)
+export(label_filter_by_id)
 export(label_filter_cmt)
 export(label_first_dose_time)
+export(label_highlight)
+export(label_highlight_values)
 export(label_ii)
 export(label_infdur)
 export(label_input_cmt)
@@ -200,9 +211,13 @@ export(plot_iiv_data_with_nm)
 export(plot_three_data_with_nm)
 export(plot_title_label)
 export(plot_title_placeholder)
+export(plotly_filename_all_label)
 export(plotly_filename_label)
+export(plotly_format_all_label)
 export(plotly_format_label)
+export(plotly_height_all_label)
 export(plotly_height_label)
+export(plotly_width_all_label)
 export(plotly_width_label)
 export(print_cov_plot)
 export(print_demog_plots)
@@ -214,9 +229,9 @@ export(run_mvp)
 export(run_single_sim)
 export(safely_eval)
 export(safely_parse)
-export(safely_run_single_sim)
 export(sample_age_wt)
 export(sanitize_numeric_input)
+export(search_id_col)
 export(select_color)
 export(select_label_size_label)
 export(select_median)
@@ -226,12 +241,14 @@ export(set_delta_observation)
 export(set_max_observation)
 export(shinydashboard_box_format)
 export(show_debugging_msg)
+export(show_mean_iiv_label)
 export(show_model_1_label)
 export(show_model_2_label)
 export(sidebar_width)
 export(slider_color)
 export(smart_x_axis)
 export(split_data_frame)
+export(tblNCA_progress)
 export(today_numeric)
 export(transpose_checkbox)
 export(two_cmt)
@@ -256,6 +273,7 @@ importFrom(data.table,fwrite)
 importFrom(data.table,merge.data.table)
 importFrom(dplyr,across)
 importFrom(dplyr,all_of)
+importFrom(dplyr,any_of)
 importFrom(dplyr,arrange)
 importFrom(dplyr,bind_rows)
 importFrom(dplyr,case_when)
@@ -269,12 +287,14 @@ importFrom(dplyr,if_else)
 importFrom(dplyr,intersect)
 importFrom(dplyr,mutate)
 importFrom(dplyr,mutate_all)
+importFrom(dplyr,n)
 importFrom(dplyr,one_of)
 importFrom(dplyr,rename)
 importFrom(dplyr,select)
 importFrom(dplyr,slice_sample)
 importFrom(dplyr,summarise)
 importFrom(dplyr,sym)
+importFrom(dplyr,syms)
 importFrom(dplyr,ungroup)
 importFrom(forcats,fct_inorder)
 importFrom(ggplot2,aes)
@@ -291,13 +311,15 @@ importFrom(ggplot2,ggplot_build)
 importFrom(ggplot2,ggtitle)
 importFrom(ggplot2,label_both)
 importFrom(ggplot2,labs)
+importFrom(ggplot2,scale_color_manual)
 importFrom(ggplot2,scale_size_area)
 importFrom(ggplot2,scale_x_log10)
 importFrom(ggplot2,scale_y_log10)
 importFrom(ggplot2,stat_smooth)
 importFrom(ggplot2,stat_summary)
 importFrom(ggplot2,theme)
 importFrom(ggplot2,theme_bw)
+importFrom(ggplot2,vars)
 importFrom(ggplot2,xlab)
 importFrom(ggplot2,ylab)
 importFrom(gridExtra,arrangeGrob)
@@ -316,7 +338,7 @@ importFrom(plotly,ggplotly)
 importFrom(plotly,plotlyOutput)
 importFrom(plotly,renderPlotly)
 importFrom(purrr,modify_if)
-importFrom(purrr,safely)
+importFrom(scales,hue_pal)
 importFrom(shinyalert,shinyalert)
 importFrom(shinydashboard,box)
 importFrom(shinydashboard,valueBox)

NEWS.md

@@ -1,3 +1,15 @@
+# MVPapp 0.2.12 (2025-01-06)
+
+## Features
+
+* Individual plots for exploring uploaded datasets (#15)  
+* Mean trend toggle for variability plots (#13)  
+* Progress bars for longer computations where a spinner graphic is not feasible (#16)
+
+## Bugfixes
+
+* Allow "Total Doses" for each Dosing Regimen to be 0 (#14)
+
 # MVPapp 0.2.11 (2024-12-04)
 
 ## Features