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1. Cytocipher Cytocipher Public

   Analysis methods for analysing single cell RNA-seq data; particularly with the goal of checking if tentative clusters of cells are significantly different to one another in terms of their gene expr…

   Jupyter Notebook 32 6

2. Medulloblastoma Medulloblastoma Public

   Forked from BiomedicalMachineLearning/Medulloblastoma

   Primary analysis of Medulloblastoma PDX models for the paper: https://www.biorxiv.org/content/10.1101/2023.02.15.528116v1

   Jupyter Notebook 1

3. stLearn stLearn Public

   Forked from BiomedicalMachineLearning/stLearn

   A novel machine learning pipeline to analyse spatial transcriptomics data

   Python

4. Cytocipher_manuscript Cytocipher_manuscript Public

   Reproduces cytocipher manuscript results/figure panels.

   Jupyter Notebook 1