vignette 1

C3BI-pasteur-fr · Jun 2, 2019 · 130668c · 130668c
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commit 130668c
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Showing 38 changed files with 764 additions and 18 deletions.
diff --git a/inst/app/contributions/coE_coExpression/ui.R b/inst/app/contributions/coE_coExpression/ui.R
@@ -38,8 +38,7 @@ tabList <- list(
   coexpressionSelectedTab = shinydashboard::tabItem(
     "coexpressionSelected",
     tags$p(
-        strong("2D plot for selecting cells"),
-        "some explaination.... (Vale?)"
+        strong("2D plot for selecting cells")
     ),
     fluidRow(
       # column(

diff --git a/vignettes/SCHNAPPs_usage.Rmd b/vignettes/SCHNAPPs_usage.Rmd
diff --git a/vignettes/images/2Dplot1.png b/vignettes/images/2Dplot1.png
diff --git a/vignettes/images/2dplotAddOptions.png b/vignettes/images/2dplotAddOptions.png
diff --git a/vignettes/images/2dplotSmallGrp.png b/vignettes/images/2dplotSmallGrp.png
diff --git a/vignettes/images/CellSelection.png b/vignettes/images/CellSelection.png
diff --git a/vignettes/images/DataexplorationPanel.png b/vignettes/images/DataexplorationPanel.png
diff --git a/vignettes/images/coexpressionAll.png b/vignettes/images/coexpressionAll.png
diff --git a/vignettes/images/coexpressionSOM1.png b/vignettes/images/coexpressionSOM1.png
diff --git a/vignettes/images/coexpressionSOM2.png b/vignettes/images/coexpressionSOM2.png
diff --git a/vignettes/images/coexpressionSelected1.png b/vignettes/images/coexpressionSelected1.png
diff --git a/vignettes/images/coexpressionSelected2.png b/vignettes/images/coexpressionSelected2.png
diff --git a/vignettes/images/coexpressionSelected3.png b/vignettes/images/coexpressionSelected3.png
diff --git a/vignettes/images/coexpressionVioloin1.png b/vignettes/images/coexpressionVioloin1.png
diff --git a/vignettes/images/coexpressionVioloin2.png b/vignettes/images/coexpressionVioloin2.png
diff --git a/vignettes/images/dataexplorationExpression.png b/vignettes/images/dataexplorationExpression.png
diff --git a/vignettes/images/geneSelection1.png b/vignettes/images/geneSelection1.png
diff --git a/vignettes/images/geneSelection2.png b/vignettes/images/geneSelection2.png
diff --git a/vignettes/images/generalPC.png b/vignettes/images/generalPC.png
diff --git a/vignettes/images/generalSample.png b/vignettes/images/generalSample.png
diff --git a/vignettes/images/generalScater1.png b/vignettes/images/generalScater1.png
diff --git a/vignettes/images/generalScater2.png b/vignettes/images/generalScater2.png
diff --git a/vignettes/images/generalUMI.png b/vignettes/images/generalUMI.png
diff --git a/vignettes/images/heatmap1.png b/vignettes/images/heatmap1.png
diff --git a/vignettes/images/heatmap2.png b/vignettes/images/heatmap2.png
diff --git a/vignettes/images/heatmap3.png b/vignettes/images/heatmap3.png
diff --git a/vignettes/images/loadingData.png b/vignettes/images/loadingData.png
diff --git a/vignettes/images/overview.png b/vignettes/images/overview.png
diff --git a/vignettes/images/parametersGeneral.png b/vignettes/images/parametersGeneral.png
diff --git a/vignettes/images/parametersNormalization.png b/vignettes/images/parametersNormalization.png
diff --git a/vignettes/images/parametersTSNE.png b/vignettes/images/parametersTSNE.png
diff --git a/vignettes/images/parametersUMAP.png b/vignettes/images/parametersUMAP.png
diff --git a/vignettes/images/subclusteranalysis1.png b/vignettes/images/subclusteranalysis1.png
diff --git a/vignettes/images/subclusteranalysis2.png b/vignettes/images/subclusteranalysis2.png
diff --git a/vignettes/images/table1.png b/vignettes/images/table1.png
diff --git a/vignettes/images/tableAll.png b/vignettes/images/tableAll.png
diff --git a/vignettes/images/tableReorder.png b/vignettes/images/tableReorder.png
diff --git a/vignettes/images/tableSelect2.png b/vignettes/images/tableSelect2.png