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@CAREamics

CAREamics

README.md

CAREamics

CAREamics is a PyTorch library aimed at simplifying the use of Noise2Void and its many variants and cousins (CARE, Noise2Noise, N2V2, P(P)N2V, HDN, muSplit etc.).

Why CAREamics?

Noise2Void is a widely used denoising algorithm, and is readily available from the n2v python package. However, n2v is based on TensorFlow and Keras, and our more recent methods (PPN2V, DivNoising, HDN) are all implemented in PyTorch, but are lacking the extra features that would make them usable by the community.

The aim of CAREamics is to provide a PyTorch library reuniting all the latest methods in one package, while providing a simple and consistent API. The library relies on PyTorch Lightning as a back-end. In addition, we will provide extensive documentation and tutorials on how to best apply these methods in a scientific context.

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  1. careamics-portfolio careamics-portfolio Public

    A helper package to download example datasets used in various publications by the Jug lab, including data featured in N2V, P(P)N2V, DivNoising, HDN, EmbedSeg, etc.

    Python

Repositories

Showing 8 of 8 repositories
  • careamics-portfolio Public

    A helper package to download example datasets used in various publications by the Jug lab, including data featured in N2V, P(P)N2V, DivNoising, HDN, EmbedSeg, etc.

    CAREamics/careamics-portfolio’s past year of commit activity
    Python 0 BSD-3-Clause 0 5 2 Updated Nov 4, 2024
  • careamics Public

    A deep-learning library for N2V and friends

    CAREamics/careamics’s past year of commit activity
    Python 30 BSD-3-Clause 5 14 6 Updated Nov 4, 2024
  • microSplit-reproducibility Public

    A repository containing notebooks and scripts for reproducing results and figures for microSplit paper

    CAREamics/microSplit-reproducibility’s past year of commit activity
    Jupyter Notebook 1 2 0 1 Updated Nov 4, 2024
  • careamics-examples Public

    Examples and code snippets for CAREamics

    CAREamics/careamics-examples’s past year of commit activity
    Jupyter Notebook 0 BSD-3-Clause 1 2 1 Updated Oct 30, 2024
  • careamics-napari Public

    napari plugin for CAREamics

    CAREamics/careamics-napari’s past year of commit activity
    Python 3 BSD-3-Clause 0 3 0 Updated Oct 30, 2024
  • careamics.github.io Public
    CAREamics/careamics.github.io’s past year of commit activity
    Python 0 BSD-3-Clause 2 2 0 Updated Oct 27, 2024
  • careamics-stubs Public

    Stubs for CAREamics.

    CAREamics/careamics-stubs’s past year of commit activity
    Python 0 BSD-3-Clause 0 0 0 Updated Oct 20, 2024
  • .github Public

    Organization README

    CAREamics/.github’s past year of commit activity
    0 0 0 0 Updated May 31, 2024

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