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Merge branch 'add-mpsii-comments-mapping' into add-mpsii-comments-map…
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…ping-refactor
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jorg3lopez authored Oct 23, 2024
2 parents ea3231e + 39aa1cc commit c0b4ef4
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2 changes: 1 addition & 1 deletion .github/workflows/automated-staging-test-submit.yml
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Expand Up @@ -30,7 +30,7 @@ jobs:
run: |
host=https://staging.prime.cdc.gov:443
client_id=flexion
client_sender=automated-staging-test-sender
client_sender=simulated-sender
jwt=$(jwt encode --exp='+5min' --jti $(uuidgen) --alg RS256 \
-k $client_id.$client_sender -i $client_id.$client_sender \
-s $client_id.$client_sender -a $host --no-iat -S @/tmp/staging_private_key.pem)
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2 changes: 1 addition & 1 deletion .pr_agent.toml
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Expand Up @@ -18,7 +18,7 @@ pr_actions = ["opened", "reopened", "ready_for_review", "review_requested"]
# general options
num_code_suggestions=3 # Number of code suggestions provided by the 'review' tool. Default is 0, meaning no code suggestions will be provided by the `review` tool.
inline_code_comments = true # If set to true, the tool will publish the code suggestions as comments on the code diff. Default is false. Note that you need to set `num_code_suggestions`>0 to get code suggestions
ask_and_reflect=false
ask_and_reflect=true
persistent_comment=false
#automatic_review=true
extra_instructions = "" # Optional extra instructions to the tool. For example: "focus on the changes in the file X. Ignore change in ...".
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8 changes: 4 additions & 4 deletions e2e/build.gradle
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Expand Up @@ -19,10 +19,10 @@ dependencies {
implementation 'com.fasterxml.jackson.core:jackson-databind:2.18.0'

//fhir
implementation 'ca.uhn.hapi.fhir:hapi-fhir-base:7.4.3'
implementation 'ca.uhn.hapi.fhir:hapi-fhir-structures-r4:7.4.3'
implementation 'ca.uhn.hapi.fhir:hapi-fhir-caching-caffeine:7.4.3'
implementation 'ca.uhn.hapi.fhir:hapi-fhir-validation-resources-r4:7.4.3'
implementation 'ca.uhn.hapi.fhir:hapi-fhir-base:7.4.5'
implementation 'ca.uhn.hapi.fhir:hapi-fhir-structures-r4:7.4.5'
implementation 'ca.uhn.hapi.fhir:hapi-fhir-caching-caffeine:7.4.5'
implementation 'ca.uhn.hapi.fhir:hapi-fhir-validation-resources-r4:7.4.5'
implementation 'org.fhir:ucum:1.0.8'

testImplementation 'org.apache.groovy:groovy:4.0.23'
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2,046 changes: 1,063 additions & 983 deletions examples/CA/003_CA_ORU_R01_CDPH_produced_1_hl7_translation.fhir

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1,717 changes: 841 additions & 876 deletions examples/CA/003_CA_ORU_R01_CDPH_produced_2_fhir_transformation.fhir

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155 changes: 1 addition & 154 deletions examples/CA/003_CA_ORU_R01_CDPH_produced_3_hl7_translation_final.hl7

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