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CGAT

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  1. UMI-tools UMI-tools Public

    Tools for handling Unique Molecular Identifiers in NGS data sets

    Python 495 192

  2. cgat cgat Public

    Do not use - please refer to our newest code: https://github.com/cgat-developers/cgat-apps

    Python 124 66

  3. CGATPipelines CGATPipelines Public

    Collection of CGAT NGS Pipelines

    Python 43 18

  4. UMI-tools_pipelines UMI-tools_pipelines Public

    Pipelines for re-analysis of iCLIP and scRNA-Seq data for UMI-tools publication

    Jupyter Notebook 10 5

  5. dashboard dashboard Public

    Forked from chillu/github-dashing

    Dashboard to monitor projects and software development within the CGAT group (www.cgat.org)

    JavaScript 4 5

  6. proj029 proj029 Public

    Scripts for proj029

    Python 2

Repositories

Showing 10 of 18 repositories
  • UMI-tools Public

    Tools for handling Unique Molecular Identifiers in NGS data sets

    CGATOxford/UMI-tools’s past year of commit activity
    Python 495 MIT 192 17 4 Updated Oct 16, 2024
  • UMI-tools_pipelines Public

    Pipelines for re-analysis of iCLIP and scRNA-Seq data for UMI-tools publication

    CGATOxford/UMI-tools_pipelines’s past year of commit activity
    Jupyter Notebook 10 5 1 0 Updated Jun 13, 2022
  • bioconda-recipes Public Forked from bioconda/bioconda-recipes

    Conda recipes for the bioconda channel.

    CGATOxford/bioconda-recipes’s past year of commit activity
    Shell 0 3,325 0 0 Updated Nov 1, 2019
  • dashboard Public Forked from chillu/github-dashing

    Dashboard to monitor projects and software development within the CGAT group (www.cgat.org)

    CGATOxford/dashboard’s past year of commit activity
    JavaScript 4 MIT 61 0 0 Updated Nov 19, 2018
  • cgat Public

    Do not use - please refer to our newest code: https://github.com/cgat-developers/cgat-apps

    CGATOxford/cgat’s past year of commit activity
    Python 124 BSD-3-Clause 66 6 0 Updated Nov 8, 2018
  • CGATCore Public

    Further development of the CGATCore has moved to a new repository. Please see

    CGATOxford/CGATCore’s past year of commit activity
    Python 0 BSD-3-Clause 1 0 0 Updated Nov 8, 2018
  • CGATPipelines Public

    Collection of CGAT NGS Pipelines

    CGATOxford/CGATPipelines’s past year of commit activity
    Python 43 MIT 18 8 1 Updated Nov 8, 2018
  • Notebooks Public

    ipython Notebooks

    CGATOxford/Notebooks’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Oct 9, 2018
  • CGATTests Public

    Test scripts and configuration for Jenkins CI testing of workflows

    CGATOxford/CGATTests’s past year of commit activity
    Python 1 MIT 1 0 0 Updated Jun 8, 2018
  • DanQ_tensorflow Public

    tensorflow adaptation of DanQ

    CGATOxford/DanQ_tensorflow’s past year of commit activity
    Jupyter Notebook 2 0 1 0 Updated Dec 12, 2017
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