Merge pull request #45 from grst/patch-1

Fix issue with diff_nhood_enrichment when more than two conditions are present
CSOgroup · Jul 2, 2024 · e279ce8 · e279ce8
2 parents 734f014 + 8462cc4
commit e279ce8
Showing 1 changed file with 2 additions and 2 deletions.
diff --git a/src/cellcharter/gr/_nhood.py b/src/cellcharter/gr/_nhood.py
@@ -344,8 +344,8 @@ def diff_nhood_enrichment(
                         pbar.update(1)
 
                     expected = np.stack(expected, axis=0)
-                    pvalues = _empirical_pvalues(observed, expected)
-                    result[result_key]["pvalue"] = pvalues
+                    tmp_pvalues = _empirical_pvalues(observed, expected)
+                    result[result_key]["pvalue"] = tmp_pvalues
 
     if copy:
         return result