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Releases: Clinical-Genomics/cg_lims

Release v8.0.4

07 Feb 14:23
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Update the Femtopulse Run File EPP to handle more samples per file (#587)

Fixed

  • Being able to expand the csv file with more than 11 samples and ladders (specified by the user in LIMS)

Release v8.0.3

07 Feb 14:20
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Patch for volume corrections and additions in EPP Calculate Revio ABC SPRQ Volumes (#590)

Added

  • Setting of Volume Elution (ul) which is a preset value (25) from the cli command

Fixed

  • The calculation of the cleanup bead volume
  • Refactoring

Release v8.0.2

07 Feb 14:13
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calculate amount volume flexibility (#593)

Changed

  • click option volume_udf changed to volume_udf_option which is not required

Release v8.0.1

07 Feb 08:46
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Patch EPP for setting Revio sequencing settings (#591)(patch)

Fixed

  • Update the EPP for automatically setting the sequencing options for a Revio run

Release v8.0.0

06 Feb 11:17
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Add SMRT Link API client and EPP for fetching run information (#586)(major)

Added

  • Added a client for working with the SMRT Link API
  • Added a new EPP for fetching run information from SMRT Link
  • Added support for the updated LIMS config

Changed

  • Refactored the location of modules used for setting up the API connection to StatusDB (cg)

Release v7.19.5

05 Feb 12:57
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Refactor SMRT Cell pooling calculator to comply with the changes in SMRT Link 25.1 (#582)(patch)

Added

  • New flag --sequencing-container-udf
  • New flag --control-volume-udf

Changed

  • Updated the calculations to be based on the amount of SMRT cells to be loaded
  • The amount of control added to the pool is now calculated and set

Release v7.19.4

24 Jan 14:25
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New EPP: Calculate ABC Reagent Volumes for Revio Sequencing (#583)

  • New EPP Revio ABC Volumes

Release v7.19.3

20 Jan 08:12
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Run Design patch for SMRT Link 25.1 (#579)(patch)

Fixed

  • Patched the Run Design creator to comply with the changes introduced in SMRT Link v25.1

Release v7.19.2

17 Jan 12:49
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Patch broken error handling in new quantit parser (#578)(patch)

Fixed

  • The error messages sent out in the new Quant-iT parser

Release v7.19.1

16 Jan 15:21
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Volume as process udf to calculate amount (#577)

Added

  • The option to calculate the amount with the volume as a process udf in the step