FIX: define dev dependencies as dependency groups (#26)

* DX: run `pyright` in `tox -e sty` job
* FIX: remove `pre-commit-uv` and `tox` from environment
* MAINT: clean up `style` dependencies
* MAINT: update lock files

.binder/postBuild

@@ -3,10 +3,12 @@ set -ex
 curl -LsSf https://astral.sh/uv/install.sh | sh
 source $HOME/.cargo/env
 uv export \
-  --extra jupyter \
-  --extra notebooks \
+  --group jupyter \
+  --group notebooks \
+  --no-dev \
   > requirements.txt
 uv pip install \
   --requirement requirements.txt \
   --system
+rm requirements.txt
 uv cache clean

.github/workflows/ci.yml

@@ -28,7 +28,7 @@ on:
 
 jobs:
   doc:
-    uses: ComPWA/actions/.github/workflows/ci-docs.yml@v2
+    uses: ComPWA/actions/.github/workflows/ci-docs.yml@v2.1
     permissions:
       pages: write
       id-token: write
@@ -39,4 +39,4 @@ jobs:
     if: inputs.specific-pip-packages == ''
     secrets:
       token: ${{ secrets.PAT }}
-    uses: ComPWA/actions/.github/workflows/pre-commit.yml@v2
+    uses: ComPWA/actions/.github/workflows/pre-commit.yml@v2.1

.pre-commit-config.yaml

@@ -12,7 +12,7 @@ repos:
       - id: check-useless-excludes
 
   - repo: https://github.com/ComPWA/policy
-    rev: 0.5.0
+    rev: 0.5.5
     hooks:
       - id: check-dev-files
         args:
@@ -52,7 +52,7 @@ repos:
             metadata.vscode
 
   - repo: https://github.com/astral-sh/ruff-pre-commit
-    rev: v0.7.0
+    rev: v0.7.1
     hooks:
       - id: ruff
         args: [--fix]
@@ -104,11 +104,11 @@ repos:
           )$
 
   - repo: https://github.com/ComPWA/pyright-pre-commit
-    rev: v1.1.385
+    rev: v1.1.386
     hooks:
       - id: pyright
 
   - repo: https://github.com/astral-sh/uv-pre-commit
-    rev: 0.4.24
+    rev: 0.4.27
     hooks:
       - id: uv-lock

pyproject.toml

@@ -15,17 +15,20 @@ license = {text = "GPLv3 or later"}
 name = "benchmarks"
 requires-python = ">=3.12"
 
-[project.optional-dependencies]
+[project.readme]
+content-type = "text/markdown"
+file = "README.md"
+
+[dependency-groups]
 dev = [
-    "benchmarks[doc]",
-    "benchmarks[jupyter]",
-    "benchmarks[sty]",
-    "benchmarks[test]",
+    "ruff",
     "sphinx-autobuild",
-    "tox",
+    {include-group = "doc"},
+    {include-group = "jupyter"},
+    {include-group = "style"},
+    {include-group = "test"},
 ]
 doc = [
-    "benchmarks[notebooks]",
     "myst-nb",
     "myst-parser[linkify]",
     "sphinx",
@@ -34,41 +37,25 @@ doc = [
     "sphinx-codeautolink[ipython]",
     "sphinx-copybutton",
     "sphinx-togglebutton",
+    {include-group = "notebooks"},
 ]
 jupyter = [
     "jupyterlab",
     "jupyterlab",
-    "jupyterlab-code-formatter >=3.0.0",
+    "jupyterlab-code-formatter",
     "jupyterlab-git",
     "jupyterlab-lsp",
     "jupyterlab-myst",
     "jupyterlab-myst",
     "python-lsp-ruff",
     "python-lsp-server[rope]",
 ]
-lint = [
-    "ruff",
-]
-notebooks = [
-    "pandas",
-]
-sty = [
-    "benchmarks[format]",
-    "benchmarks[lint]",
-    "benchmarks[types]",
-    "pre-commit-uv",
-    "ruff",
-]
+notebooks = ["pandas"]
+style = ["sphinx-api-relink"]
 test = [
     "nbmake",
+    {include-group = "notebooks"},
 ]
-types = [
-    "sphinx-api-relink",
-]
-
-[project.readme]
-content-type = "text/markdown"
-file = "README.md"
 
 [tool.setuptools]
 include-package-data = false
@@ -95,6 +82,8 @@ reportUnusedFunction = true
 reportUnusedImport = true
 reportUnusedVariable = true
 typeCheckingMode = "strict"
+venv = ".venv"
+venvPath = "."
 
 [tool.pytest.ini_options]
 addopts = [
@@ -304,8 +293,6 @@ description = Run all notebooks with pytest
 allowlist_externals =
     pre-commit
 commands =
-    pre-commit run {posargs} --all-files
+    pre-commit run --all-files {posargs}
 description = Perform all linting, formatting, and spelling checks
-setenv =
-    SKIP = pyright
 """