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  1. WholeCellEcoliRelease WholeCellEcoliRelease Public

    Release of the whole cell E. coli model.

    Python 63 15

Repositories

Showing 10 of 31 repositories
  • vEcoli Public

    Whole cell model of E. coli implemented with Vivarium

    CovertLab/vEcoli’s past year of commit activity
    Jupyter Notebook 12 MIT 4 6 2 Updated Feb 20, 2025
  • wcEcoli Public

    Whole Cell Model of E. coli

    CovertLab/wcEcoli’s past year of commit activity
    Python 19 5 150 2 Updated Feb 20, 2025
  • BIOE101-Online-Companion Public

    This repository is an online companion to BIOE101/210: Systems Biology, providing code and resources to support the textbook.

    CovertLab/BIOE101-Online-Companion’s past year of commit activity
    Jupyter Notebook 0 0 0 0 Updated Feb 10, 2025
  • arrow Public

    Stochastic simulations in python

    CovertLab/arrow’s past year of commit activity
    Python 3 MIT 1 17 1 Updated Dec 12, 2024
  • WholeCellEcoliRelease Public

    Release of the whole cell E. coli model.

    CovertLab/WholeCellEcoliRelease’s past year of commit activity
    Python 63 15 0 6 Updated Dec 10, 2024
  • orjson Public Forked from ijl/orjson

    Fast, correct Python JSON library supporting dataclasses, datetimes, and numpy

    CovertLab/orjson’s past year of commit activity
    Python 0 Apache-2.0 234 0 0 Updated Jul 3, 2024
  • short-gene-alignment Public
    CovertLab/short-gene-alignment’s past year of commit activity
    Python 0 0 0 0 Updated Feb 28, 2024
  • Rend-seq-plots Public
    CovertLab/Rend-seq-plots’s past year of commit activity
    Jupyter Notebook 0 1 0 0 Updated Feb 28, 2024
  • borealis Public

    Run FireWorks workflows in Google Cloud.

    CovertLab/borealis’s past year of commit activity
    Python 4 MIT 1 1 3 Updated Jun 6, 2023
  • wcecoli-colony-analysis Public

    Code and analysis for the "Whole-Colony Modeling of Escherichia coli" that is currently in preparation.

    CovertLab/wcecoli-colony-analysis’s past year of commit activity
    Python 0 GPL-3.0 0 0 0 Updated Aug 23, 2022
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