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fix typos (#274)
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mirjagranfors authored Jan 31, 2025
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6 changes: 3 additions & 3 deletions tutorials/3-advanced-topics/DTAT321_scatterers.ipynb
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"source": [
"## 1. What is a Scatterer?\n",
"\n",
"Scatterers are implementations of the abstract class `Feature` that represent scattering objects (see also [features_example](features_example.ipynb)). When calculating the scattered field, they are discretized into voxels.\n",
"Scatterers are implementations of the abstract class `Feature` that represent scattering objects (see also [features_example](DTAT301_features.ipynb)). When calculating the scattered field, they are discretized into voxels.\n",
"\n",
"All physcial properties of scatterers are given in SI units, unless otherwise stated. In particular, the position of a scatterer is measured from the top left corner of the image and can either be given in meters (default) or pixels by setting the property `position_unit` to `\"meter\"` or `\"pixel\"`. The z-position of the particle can either be set as the the third element of the property `position`, or as the property `z`. The calculation of a scatterer is automatically upsampled using the `upsample` property.\n",
"\n",
"All scatterers need a reference to the optical system through which they are viewed in order to calculate scale factors. This is achieved by calling an optical device from the `optics` module (see also [optics_example](optics_example.ipynb)) with the scatterer."
"All scatterers need a reference to the optical system through which they are viewed in order to calculate scale factors. This is achieved by calling an optical device from the `optics` module (see also [optics_example](DTAT323_optics.ipynb)) with the scatterer."
]
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"source": [
"## 2. Setup the Optics Device \n",
"\n",
"Create an optical device `optics` though which to view scatterers, in this case a fluorescence microscope implemented by the `Fluorescence` class."
"Create an optical device `optics` through which to view scatterers, in this case a fluorescence microscope implemented by the `Fluorescence` class."
]
},
{
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