adding database parameters to conf for ri-tools image

EGA-archive · Aug 30, 2024 · 21119cb · 21119cb
1 parent 614282c
commit 21119cb
Showing 1 changed file with 10 additions and 2 deletions.
diff --git a/deploy/ri-tools/conf/conf.py b/deploy/ri-tools/conf/conf.py
@@ -1,7 +1,15 @@
 #### Input and Output files config parameters ####
-csv_folder = './csv/examples/'
+csv_folder = './csv/DATOS-CAT/'
 output_docs_folder='./output_docs/'
 
 #### VCF Conversion config parameters ####
 allele_frequency=1 # introduce float number, leave 1 if you want to convert all the variants
-reference_genome='GRCh38' # Choose one between NCBI36, GRCh37, GRCh38
+reference_genome='GRCh38' # Choose one between NCBI36, GRCh37, GRCh38
+
+### MongoDB parameters ###
+database_host = 'mongo'
+database_port = 27017
+database_user = 'root'
+database_password = 'example'
+database_name = 'beacon'
+database_auth_source = 'admin'