test cases for conceptmap validation

FHIR · Sep 5, 2023 · 66827fa · 66827fa
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diff --git a/validator/cm-cs.json b/validator/cm-cs.json
@@ -0,0 +1,46 @@
+{
+  "resourceType" : "CodeSystem",
+  "id" : "ch-ig-example",
+  "text" : {
+    "status" : "generated",
+    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">Placeholder</div>"
+  },
+  "url" : "http://fhir.ch/ig/ch-ig/CodeSystem/ch-ig-example",
+  "version" : "0.1.0",
+  "name" : "ChIgExample",
+  "title" : "CH IG Example",
+  "status" : "draft",
+  "experimental" : true,
+  "date" : "2023-09-05T12:08:22+00:00",
+  "publisher" : "HL7 Switzerland",
+  "contact" : [{
+    "name" : "HL7 Switzerland",
+    "telecom" : [{
+      "system" : "url",
+      "value" : "https://www.hl7.ch/"
+    }]
+  }],
+  "description" : "CH IG Example code system is just an example!",
+  "jurisdiction" : [{
+    "coding" : [{
+      "system" : "urn:iso:std:iso:3166",
+      "code" : "CHE"
+    }]
+  }],
+  "copyright" : "CC0-1.0",
+  "caseSensitive" : true,
+  "content" : "complete",
+  "count" : 3,
+  "concept" : [{
+    "code" : "med",
+    "display" : "Example med"
+  },
+  {
+    "code" : "pharm",
+    "display" : "Example pharm"
+  },
+  {
+    "code" : "vac",
+    "display" : "Example vac"
+  }]
+}
diff --git a/validator/cm-vs.json b/validator/cm-vs.json
@@ -0,0 +1,42 @@
+{
+  "resourceType" : "ValueSet",
+  "id" : "OrganizationType",
+  "text" : {
+    "status" : "generated",
+    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">Placeholder</div>"
+  },
+  "url" : "http://fhir.ch/ig/ch-ig/ValueSet/ch-ig-example",
+  "version" : "0.1.0",
+  "name" : "OrganizationType",
+  "title" : "Organization Type",
+  "status" : "draft",
+  "experimental" : true,
+  "date" : "2023-09-05T12:08:22+00:00",
+  "publisher" : "HL7 Switzerland",
+  "contact" : [{
+    "name" : "HL7 Switzerland",
+    "telecom" : [{
+      "system" : "url",
+      "value" : "https://www.hl7.ch/"
+    }]
+  }],
+  "description" : "Test value set",
+  "jurisdiction" : [{
+    "coding" : [{
+      "system" : "urn:iso:std:iso:3166",
+      "code" : "CHE"
+    }]
+  }],
+  "copyright" : "CC0-1.0",
+  "compose" : {
+    "include" : [{
+      "system" : "http://fhir.ch/ig/ch-ig/CodeSystem/ch-ig-example",
+      "concept" : [{
+        "code" : "pharm"
+      },
+      {
+        "code" : "vac"
+      }]
+    }]
+  }
+}
diff --git a/validator/cm-vs2.json b/validator/cm-vs2.json
@@ -0,0 +1,45 @@
+{
+  "resourceType" : "ValueSet",
+  "id" : "OrganizationType",
+  "text" : {
+    "status" : "generated",
+    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">Placeholder</div>"
+  },
+  "url" : "http://fhir.ch/ig/ch-ig/ValueSet/OrganizationType",
+  "version" : "0.1.0",
+  "name" : "OrganizationType",
+  "title" : "Organization Type",
+  "status" : "draft",
+  "experimental" : true,
+  "date" : "2023-09-05T12:08:22+00:00",
+  "publisher" : "HL7 Switzerland",
+  "contact" : [{
+    "name" : "HL7 Switzerland",
+    "telecom" : [{
+      "system" : "url",
+      "value" : "https://www.hl7.ch/"
+    }]
+  }],
+  "description" : "Test value set",
+  "jurisdiction" : [{
+    "coding" : [{
+      "system" : "urn:iso:std:iso:3166",
+      "code" : "CHE"
+    }]
+  }],
+  "copyright" : "CC0-1.0",
+  "compose" : {
+    "include" : [{
+      "system" : "http://snomed.info/sct",
+      "version" : "http://snomed.info/sct/2011000195101",
+      "concept" : [{
+        "code" : "288565001",
+        "display" : "Medical center (environment)"
+      },
+      {
+        "code" : "264372000",
+        "display" : "Pharmacy (environment)"
+      }]
+    }]
+  }
+}
diff --git a/validator/cm.json b/validator/cm.json
@@ -0,0 +1,59 @@
+{
+  "resourceType" : "ConceptMap",
+  "id" : "OrganizationTypeToTest",
+  "text" : {
+    "status" : "extensions",
+    "div" : "<div xmlns=\"http://www.w3.org/1999/xhtml\">Placeholder</div>"
+  },
+  "url" : "http://fhir.ch/ig/ch-ig/ConceptMap/OrganizationTypeToTest",
+  "version" : "0.1.0",
+  "name" : "OrganizationType",
+  "title" : "Organization Type Mapping",
+  "status" : "active",
+  "experimental" : true,
+  "date" : "2023-09-05T12:08:22+00:00",
+  "publisher" : "HL7 Switzerland",
+  "contact" : [{
+    "name" : "HL7 Switzerland",
+    "telecom" : [{
+      "system" : "url",
+      "value" : "https://www.hl7.ch/"
+    }]
+  }],
+  "description" : "Test ConceptMap",
+  "jurisdiction" : [{
+    "coding" : [{
+      "system" : "urn:iso:std:iso:3166",
+      "code" : "CHE"
+    }]
+  }],
+  "copyright" : "CC0-1.0",
+  "sourceCanonical" : "http://fhir.ch/ig/ch-ig/ValueSet/ch-ig-example",
+  "targetCanonical" : "http://fhir.ch/ig/ch-ig/ValueSet/OrganizationType",
+  "group" : [{
+    "source" : "http://fhir.ch/ig/ch-ig/CodeSystem/ch-ig-example",
+    "target" : "http://snomed.info/sct",
+    "targetVersion" : "http://snomed.info/sct/2011000195101",
+    "element" : [{
+      "code" : "med",
+      "target" : [{
+        "code" : "264358009",
+        "equivalence" : "equivalent"
+      }]
+    },
+    {
+      "code" : "vac",
+      "target" : [{
+        "code" : "46224007",
+        "equivalence" : "equivalent"
+      }]
+    },
+    {
+      "code" : "pharm",
+      "target" : [{
+        "code" : "264372000",
+        "equivalence" : "equivalent"
+      }]
+    }]
+  }]
+}
diff --git a/validator/manifest.json b/validator/manifest.json
@@ -33645,7 +33645,102 @@
       }
     },
     {
-      "todo": "inactive codes: active, inactive, retired against all three valuesets, and without a value set",
+      "name": "cm",
+      "file": "cm.json",
+      "supporting": [
+        "cm-vs.json", "cm-cs.json"
+      ],
+      "description": "ConceptMap maps something not in the value set",
+      "version" : "4.0",
+      "java": {
+        "outcome": {
+          "resourceType" : "OperationOutcome",
+          "issue" : [{
+            "severity" : "error",
+            "code" : "required",
+            "details" : {
+              "text" : "The source code 'med' is not valid in the value set http://fhir.ch/ig/ch-ig/ValueSet/ch-ig-example|0.1.0"
+            },
+            "diagnostics" : "[38,21]",
+            "expression" : ["ConceptMap.group[0].element[0].code"]
+          }]
+        }
+      }
+    },
+    {
+      "name": "cm2",
+      "file": "cm.json",
+      "supporting": [
+        "cm-vs2.json", "cm-cs.json"
+      ],
+      "description": "ConceptMap maps something not in the value set *in snomed*",
+      "version" : "4.0",
+      "java": {
+        "outcome": {
+          "resourceType" : "OperationOutcome",
+          "issue" : [{
+            "severity" : "error",
+            "code" : "business-rule",
+            "details" : {
+              "text" : "The code '46224007' in the system http://snomed.info/sct version http://snomed.info/sct/2011000195101 is not valid in the value set 'http://fhir.ch/ig/ch-ig/ValueSet/OrganizationType'"
+            },
+            "diagnostics" : "[47,28]",
+            "expression" : ["ConceptMap.group[0].element[1].target[0].code"]
+          }]
+        }
+      }
+    },
+    {
+      "name": "mi-use-derived",
+      "file": "mi-use-derived.xml",
+      "supporting": [
+        "mi-defn-base.xml", "mi-use-base.xml", "mi-defn-derived.xml"
+      ],
+      "description": "Profiling to a derived profile",
+      "version" : "5.0",
+      "java": {
+        "outcome": {
+          "resourceType": "OperationOutcome"
+        }
+      }
+    },
+    {
+      "name": "mi-use-distinct",
+      "file": "mi-use-distinct.xml",
+      "supporting": [
+        "mi-defn-base.xml", "mi-use-base.xml", "mi-defn-distinct.xml"
+      ],
+      "description": "Profiling to a distinct profile (illegal)",
+      "version" : "5.0",
+      "java": {
+        "outcome": {
+          "resourceType" : "OperationOutcome",
+          "issue" : [{
+            "severity" : "error",
+            "code" : "exception",
+            "details" : {
+              "text" : "Error generating Snapshot: StructureDefinition http://hl7.org/fhir/test/StructureDefinition/mi-use-distinct at Observation.subject: invalid constrained type Reference(http://hl7.org/fhir/test/StructureDefinition/mi-defn-distinct) from Reference(http://hl7.org/fhir/test/StructureDefinition/mi-defn-base) in http://hl7.org/fhir/test/StructureDefinition/mi-use-distinct (this usually arises from a problem in the differential)"
+            },
+            "expression" : ["StructureDefinition"]
+          }]
+        }
+      }
+    },
+    {
+      "name": "mi-use-imposed",
+      "file": "mi-use-imposed.xml",
+      "supporting": [
+        "mi-defn-base.xml", "mi-use-base.xml", "mi-defn-imposed.xml"
+      ],
+      "description": "Profiling to a imposed profile",
+      "version" : "5.0",
+      "java": {
+        "outcome": {
+          "resourceType": "OperationOutcome"
+        }
+      }
+    },
+    {
       "name": "zzz",
       "file": "zzz.json",
       "description": "hack to close ups",