AwfSample

<?xml version="1.0" encoding="UTF-8"?>
<awd:workflow xmlns:awd="http://tolkin.org/awf/definition" name="test" owner="hzhu">
	<awd:actor name="Muscle1" program="muscle">
		<awd:input name="fastaInput" type="fasta"/>
		<awd:output name="alignOutput" type="phylip-interleaved"/>
	</awd:actor>
	<awd:actor name="RAxML1" program="RAxML">
		<awd:parameter name="likelihoodEpsilon" value="0.00001"/>
		<awd:parameter name="nucleotideSubstitutionModel" value="GTRCAT"/>
	</awd:actor>
	<awd:relation name="relation1"/>
	<awd:link actor="Muscle1" port="alignOutput" type="out" relation="relation1"/>
	<awd:link actor="RAxML1" port="sequenceFileInput" type="in" relation="relation1"/>
</awd:workflow>