Merge pull request #1 from Ferlab-Ste-Justine/feat/cqdg-825

feat: CQDG-825 create extendedMapping endpoint

package.json

@@ -1,6 +1,6 @@
 {
   "name": "cqdg-wrapper-next",
-  "version": "2.0.15",
+  "version": "2.0.16",
   "description": ":factory: a data-model aware GraphQL API that sits above an Elasticsearch cluster",
   "main": "src/index.js",
   "type": "module",

src/app.ts

@@ -9,7 +9,8 @@ import { Keycloak } from 'keycloak-connect';
 import NodeCache from 'node-cache';
 
 import packageJson from '../package.json' assert { type: 'json' };
-import { cacheTTL, esHost, keycloakURL, maxSetContentSize, usersApiURL } from './config/env';
+import { cacheTTL, esHost, isDev, keycloakURL, maxSetContentSize, usersApiURL } from './config/env';
+import { getExtendedMapping } from './endpoints/extendedMapping';
 import genomicFeatureSuggestions, { SUGGESTIONS_TYPES } from './endpoints/genomicFeatureSuggestions';
 import { getPhenotypesNodes } from './endpoints/phenotypes';
 import { getStatistics } from './endpoints/statistics';
@@ -143,6 +144,10 @@ const buildApp = (keycloak: Keycloak): Express => {
     return res.send({ data });
   });
 
+  app.get('/extendedMapping/:index', keycloak.protect(), async (req, res) => {
+    return getExtendedMapping(req, res);
+  });
+
   app.use(globalErrorLogger, globalErrorHandler);
 
   return app;

src/endpoints/extendedMapping.ts

@@ -0,0 +1,13 @@
+import { Request, Response } from 'express';
+import { StatusCodes } from 'http-status-codes';
+
+import { getExtendedMappingByIndex } from '#src/utils';
+
+export const getExtendedMapping = async (req: Request, res: Response) => {
+  const graphqlIndex = req.params.index;
+  const extendedMapping = getExtendedMappingByIndex(graphqlIndex);
+
+  return res.status(StatusCodes.OK).send({
+    extendedMapping,
+  });
+};

src/utils/index.ts

@@ -17,16 +17,22 @@ import studyExtendedMapping from '#src/graphql/study/extendedMapping';
 export const getExtendedMappingByIndex = (graphqlIndex = '') => {
   switch (graphqlIndex) {
     case 'Participant':
+    case 'participant':
       return participantExtendedMapping;
     case 'Biospecimen':
+    case 'biospecimen':
       return sampleExtendedMapping;
     case 'File':
+    case 'file':
       return fileExtendedMapping;
     case 'Variant':
+    case 'variant':
       return variantExtendedMapping;
     case 'Gene':
+    case 'gene':
       return geneExtendedMapping;
     case 'Study':
+    case 'study':
       return studyExtendedMapping;
   }
 };