Merge pull request #107 from smoe/alignments_revisited #261
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| name: C/C++ CI | |
| on: | |
| push: | |
| branches: ["main"] | |
| pull_request: | |
| branches: ["main"] | |
| jobs: | |
| build: | |
| runs-on: ${{ matrix.os }} | |
| strategy: | |
| matrix: | |
| os: [macos-latest] | |
| steps: | |
| - name: Check out repository code | |
| uses: actions/checkout@v4 | |
| - name: Install Dependencies | |
| run: | | |
| if [ "${{ matrix.os }}" = "macos-latest" ]; then | |
| arch -arm64 brew update | |
| arch -arm64 brew install autoconf-archive autoconf automake libtool m4 | |
| arch -arm64 brew install wxwidgets tinyxml zstd libpng sqlite | |
| arch -arm64 brew install dylibbundler pkg-config | |
| arch -arm64 brew install googletest | |
| elif [ "${{ matrix.os }}" = "ubuntu-latest" ]; then | |
| sudo apt-get update | |
| sudo apt-get install autoconf-archive | |
| sudo apt install libwxgtk3.2-dev || sudo apt install wx3.2-headers || sudo apt install libwxgtk3.0-gtk3-dev || sudo apt install libwxgtk3.0-dev | |
| fi | |
| - name: remove local redundancy to build-deps | |
| run: rm -f mysql* sqlite* && rm -rf clustalw tinyxml | |
| - name: autogen | |
| run: ./autogen.sh | |
| - name: configure | |
| run: ./configure | |
| - name: make | |
| run: make | |
| - name: running tests | |
| run: make check | |
| - name: install asciidoc | |
| run: | | |
| if [ "${{ matrix.os }}" = "macos-latest" ]; then | |
| arch -arm64 brew install asciidoc | |
| elif [ "${{ matrix.os }}" = "ubuntu-latest" ]; then | |
| sudo apt install asciidoc | |
| fi | |
| - name: build manual.html | |
| run: asciidoc docs/manual.adoc | |
| - name: Archive production artifacts | |
| uses: actions/upload-artifact@v3 | |
| with: | |
| name: GENtle_${{ matrix.os }} | |
| path: | | |
| GENtle | |
| variables.csv | |
| codon_catalog.csv | |
| marker.txt | |
| default.tab | |
| docs/manual.html | |
| docs/images | |
| retention-days: 10 |